Difference between revisions of "Tiso gene 8049"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGINASE-RXN ARGINASE-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/...")
(Created page with "Category:Gene == Gene Tiso_gene_8049 == * right end position: ** 10504 * transcription direction: ** NEGATIVE * left end position: ** 8531 * centisome position: ** 80.6332...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGINASE-RXN ARGINASE-RXN] ==
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== Gene Tiso_gene_8049 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 10504
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.5.3.1 EC-3.5.3.1]
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** NEGATIVE
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* left end position:
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** 8531
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* centisome position:
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** 80.63327   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-14950]]
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** 1 [[ARG]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[UREA]][c] '''+''' 1 [[L-ORNITHINE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 L-arginine[c] '''+''' 1 H2O[c] '''<=>''' 1 urea[c] '''+''' 1 L-ornithine[c]
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* Reaction: [[RXN-14957]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-14959]]
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* [[Tiso_gene_4415]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[athaliana]]
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*** Assignment: ec-number
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** [[pantograph]]-[[esiliculosus]]
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* Reaction: [[RXN0-949]]
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== Pathways  ==
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** Source: [[annotation-in-silico_annotation]]
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* [[ARGASEDEG-PWY]], L-arginine degradation I (arginase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGASEDEG-PWY ARGASEDEG-PWY]
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*** Assignment: ec-number
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Pathways associated ==
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* [[PWY-6922]], L-N&delta;-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
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* [[PWY-6987]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY0-501]]
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* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
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* [[PWY-7382]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY0-1275]]
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* [[ARG-GLU-PWY]], L-arginine degradation VII (arginase 3 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-GLU-PWY ARG-GLU-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6305]], putrescine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=10504}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20569 20569]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=8531}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00551 R00551]
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{{#set: centisome position=80.63327    }}
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* UNIPROT:
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{{#set: reaction associated=RXN-14950|RXN-14957|RXN-14959|RXN0-949}}
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** [http://www.uniprot.org/uniprot/P05089 P05089]
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{{#set: pathway associated=PWY-6987|PWY0-501|PWY-7382|PWY0-1275}}
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** [http://www.uniprot.org/uniprot/P07824 P07824]
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** [http://www.uniprot.org/uniprot/P40906 P40906]
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** [http://www.uniprot.org/uniprot/Q7M0Z3 Q7M0Z3]
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** [http://www.uniprot.org/uniprot/P14012 P14012]
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** [http://www.uniprot.org/uniprot/P37818 P37818]
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** [http://www.uniprot.org/uniprot/P49900 P49900]
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** [http://www.uniprot.org/uniprot/P39138 P39138]
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** [http://www.uniprot.org/uniprot/P53608 P53608]
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** [http://www.uniprot.org/uniprot/P72703 P72703]
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** [http://www.uniprot.org/uniprot/O68051 O68051]
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** [http://www.uniprot.org/uniprot/O49046 O49046]
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** [http://www.uniprot.org/uniprot/O76895 O76895]
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** [http://www.uniprot.org/uniprot/P33280 P33280]
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** [http://www.uniprot.org/uniprot/Q10066 Q10066]
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** [http://www.uniprot.org/uniprot/P00812 P00812]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-3.5.3.1}}
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{{#set: gene associated=Tiso_gene_4415}}
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{{#set: in pathway=ARGASEDEG-PWY|PWY-6922|ARG-PRO-PWY|ARG-GLU-PWY|PWY-4984|PWY-6305|CITRULBIO-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus|athaliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:15, 21 March 2018

Gene Tiso_gene_8049

  • right end position:
    • 10504
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 8531
  • centisome position:
    • 80.63327
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8049&oldid=40475"