Difference between revisions of "TRANS-23-DEHYDROADIPYL-COA"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHACYL-COA-DEHYDROG-RXN OHACYL-COA-DEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=TRANS-23-DEHYDROADIPYL-COA TRANS-23-DEHYDROADIPYL-COA] == * smiles: ** CC(C)(C(O)C(=O)NCCC(=O)N...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHACYL-COA-DEHYDROG-RXN OHACYL-COA-DEHYDROG-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=TRANS-23-DEHYDROADIPYL-COA TRANS-23-DEHYDROADIPYL-COA] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(C)(C(O)C(=O)NCCC(=O)NCCSC(C=CCCC(=O)[O-])=O)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
 
* common name:
 
* common name:
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** 3-hydroxyacyl-_dehydrogenase
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** trans-2,3-dehydroadipyl-coA
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** hydroxyacyl-coenzyme_a_mitochondrial
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* inchi key:
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** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
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** InChIKey=ZFXICKRXPZTFPB-KCQRSJHASA-I
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
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** 888.606   
 
* Synonym(s):
 
* Synonym(s):
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** cis-2,3-didehydroadipyl-CoA
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** 2,3-didehydroadipyl-CoA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[L-3-HYDROXYACYL-COA]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[3-KETOACYL-COA]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[RXN-2425]]
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** 1 a (3S)-3-hydroxyacyl-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 a 3-oxoacyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14262]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14027]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_18838]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18839]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14026]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5857]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7007]], methyl ketone biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7007 PWY-7007]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22432 22432]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=70679154 70679154]
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* PIR:
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* HMDB : HMDB60392
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A39592 A39592]
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* CHEBI:
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A49613 A49613]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=71044 71044]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A55045 A55045]
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* LIGAND-CPD:
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DEPGC DEPGC]
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** [http://www.genome.jp/dbget-bin/www_bget?C14144 C14144]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DWRTEP DWRTEP]
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{{#set: smiles=CC(C)(C(O)C(=O)NCCC(=O)NCCSC(C=CCCC(=O)[O-])=O)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4210 JC4210]
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{{#set: common name=trans-2,3-dehydroadipyl-coA}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4879 JC4879]
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{{#set: inchi key=InChIKey=ZFXICKRXPZTFPB-KCQRSJHASA-I}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0199 JX0199]
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{{#set: molecular weight=888.606    }}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S32607 S32607]
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{{#set: common name=cis-2,3-didehydroadipyl-CoA|2,3-didehydroadipyl-CoA}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S36678 S36678]
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{{#set: reversible reaction associated=RXN-2425}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S40743 S40743]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S54786 S54786]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57651 S57651]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S74114 S74114]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T10464 T10464]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T46866 T46866]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01778 R01778]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P21177 P21177]
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** [http://www.uniprot.org/uniprot/Q08426 Q08426]
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** [http://www.uniprot.org/uniprot/Q53924 Q53924]
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** [http://www.uniprot.org/uniprot/P07896 P07896]
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** [http://www.uniprot.org/uniprot/Q61425 Q61425]
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** [http://www.uniprot.org/uniprot/Q16836 Q16836]
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** [http://www.uniprot.org/uniprot/P28793 P28793]
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** [http://www.uniprot.org/uniprot/P22414 P22414]
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** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
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** [http://www.uniprot.org/uniprot/P34439 P34439]
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** [http://www.uniprot.org/uniprot/Q01373 Q01373]
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** [http://www.uniprot.org/uniprot/P55100 P55100]
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** [http://www.uniprot.org/uniprot/Q39659 Q39659]
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** [http://www.uniprot.org/uniprot/P00348 P00348]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
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{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
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{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
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{{#set: ec number=EC-1.1.1.35}}
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{{#set: gene associated=Tiso_gene_14262|Tiso_gene_14027|Tiso_gene_18838|Tiso_gene_18839|Tiso_gene_14026|Tiso_gene_5857}}
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{{#set: in pathway=PWY-5136|PWY-7007|FAO-PWY|PWY66-391}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:16, 21 March 2018

Metabolite TRANS-23-DEHYDROADIPYL-COA

  • smiles:
    • CC(C)(C(O)C(=O)NCCC(=O)NCCSC(C=CCCC(=O)[O-])=O)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
  • common name:
    • trans-2,3-dehydroadipyl-coA
  • inchi key:
    • InChIKey=ZFXICKRXPZTFPB-KCQRSJHASA-I
  • molecular weight:
    • 888.606
  • Synonym(s):
    • cis-2,3-didehydroadipyl-CoA
    • 2,3-didehydroadipyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(C)(C(O)C(=O)NCCC(=O)NCCSC(C=CCCC(=O)[O-])=O)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-" cannot be used as a page name in this wiki.



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