Difference between revisions of "RXN-8991"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6780 PWY-6780] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8991 RXN-8991] == * direction: ** REVERSIBLE * common name: ** 3-isopropylmalate dehydratase **...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6780 PWY-6780] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8991 RXN-8991] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** hydrogen production VI
+
** 3-isopropylmalate dehydratase
 +
** ORF
 
* Synonym(s):
 
* Synonym(s):
 +
** (2R,3S)-3-isopropylmalate hydro-lyase
 +
** β-isopropylmalate dehydratase
 +
** α-isopropylmalate isomerase
 +
** 3-isopropylmalate hydro-lyase
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''1''' reactions found over '''2''' reactions in the full pathway
+
* With identifiers:
−
* [[HYDROG-RXN]]
+
** 1 [[2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-9451]][c]
−
** 1 associated gene(s):
+
* With common name(s):
−
*** [[Tiso_gene_4288]]
+
** 1 (2R,3S)-3-isopropylmalate[c] '''<=>''' 1 H2O[c] '''+''' 1 2-isopropylmaleate[c]
−
** 2 reconstruction source(s) associated:
+
 
−
*** [[annotation-in-silico_annotation]]
+
== Genes associated with this reaction  ==
−
*** [[orthology-esiliculosus]]
+
Genes have been associated with this reaction based on different elements listed below.
−
== Reaction(s) not found ==
+
* Gene: [[Tiso_gene_12778]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=1.2.7.4-RXN 1.2.7.4-RXN]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2}}
+
* RHEA:
−
{{#set: common name=hydrogen production VI}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10676 10676]
−
{{#set: reaction found=1}}
+
* LIGAND-RXN:
−
{{#set: total reaction=2}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04001 R04001]
−
{{#set: completion rate=50.0}}
+
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=3-isopropylmalate dehydratase}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=(2R,3S)-3-isopropylmalate hydro-lyase|&beta;-isopropylmalate dehydratase|&alpha;-isopropylmalate isomerase|3-isopropylmalate hydro-lyase}}
 +
{{#set: gene associated=Tiso_gene_12778}}
 +
{{#set: in pathway=LEUSYN-PWY|PWY-6871}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:16, 21 March 2018

Reaction RXN-8991

  • direction:
    • REVERSIBLE
  • common name:
    • 3-isopropylmalate dehydratase
    • ORF
  • Synonym(s):
    • (2R,3S)-3-isopropylmalate hydro-lyase
    • β-isopropylmalate dehydratase
    • α-isopropylmalate isomerase
    • 3-isopropylmalate hydro-lyase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • LEUSYN-PWY, L-leucine biosynthesis: LEUSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-6871, 3-methylbutanol biosynthesis (engineered): PWY-6871
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-8991&oldid=40534"