Difference between revisions of "3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHACYL-COA-DEHYDROG-RXN OHACYL-COA-DEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN] == * direction: ** REVER...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHACYL-COA-DEHYDROG-RXN OHACYL-COA-DEHYDROG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** 3-hydroxyacyl-_dehydrogenase
+
** ketopantoate_hydroxymethyltransferase
−
** hydroxyacyl-coenzyme_a_mitochondrial
+
−
** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
+
** [http://enzyme.expasy.org/EC/2.1.2.11 EC-2.1.2.11]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[L-3-HYDROXYACYL-COA]][c] '''=>''' 1 [[3-KETOACYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
+
** 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[THF-GLU-N]][c] '''+''' 1 [[2-DEHYDROPANTOATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 a (3S)-3-hydroxyacyl-CoA[c] '''=>''' 1 a 3-oxoacyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
+
** 1 a 5,10-methylene-tetrahydrofolate[c] '''+''' 1 3-methyl-2-oxobutanoate[c] '''+''' 1 H2O[c] '''<=>''' 1 a tetrahydrofolate[c] '''+''' 1 2-dehydropantoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_14027]]
+
* Gene: [[Tiso_gene_14465]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_14026]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_14466]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_18839]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18838]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_5857]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_14262]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5136]], fatty acid &beta;-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
+
* [[PANTO-PWY]], phosphopantothenate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PANTO-PWY PANTO-PWY]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7007]], methyl ketone biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7007 PWY-7007]
+
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
−
* [[FAO-PWY]], fatty acid &beta;-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
+
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY66-391]], fatty acid &beta;-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
+
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pathwaytools]]
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22432 22432]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11824 11824]
−
* PIR:
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A39592 A39592]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A49613 A49613]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A55045 A55045]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DEPGC DEPGC]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DWRTEP DWRTEP]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4210 JC4210]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4879 JC4879]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0199 JX0199]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S32607 S32607]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S36678 S36678]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S40743 S40743]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S54786 S54786]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57651 S57651]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S74114 S74114]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T10464 T10464]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T46866 T46866]
+
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01778 R01778]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01226 R01226]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P21177 P21177]
+
** [http://www.uniprot.org/uniprot/Q9V0E1 Q9V0E1]
−
** [http://www.uniprot.org/uniprot/Q08426 Q08426]
+
** [http://www.uniprot.org/uniprot/Q9JUY0 Q9JUY0]
−
** [http://www.uniprot.org/uniprot/Q53924 Q53924]
+
** [http://www.uniprot.org/uniprot/P31057 P31057]
−
** [http://www.uniprot.org/uniprot/P07896 P07896]
+
** [http://www.uniprot.org/uniprot/Q9PIK1 Q9PIK1]
−
** [http://www.uniprot.org/uniprot/Q61425 Q61425]
+
** [http://www.uniprot.org/uniprot/P38122 P38122]
−
** [http://www.uniprot.org/uniprot/Q16836 Q16836]
+
** [http://www.uniprot.org/uniprot/Q09672 Q09672]
−
** [http://www.uniprot.org/uniprot/P28793 P28793]
+
** [http://www.uniprot.org/uniprot/P52997 P52997]
−
** [http://www.uniprot.org/uniprot/P22414 P22414]
+
** [http://www.uniprot.org/uniprot/Q9X712 Q9X712]
−
** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
+
** [http://www.uniprot.org/uniprot/Q9Y7B6 Q9Y7B6]
−
** [http://www.uniprot.org/uniprot/P34439 P34439]
+
** [http://www.uniprot.org/uniprot/Q9L7B2 Q9L7B2]
−
** [http://www.uniprot.org/uniprot/Q01373 Q01373]
+
** [http://www.uniprot.org/uniprot/Q9RKS2 Q9RKS2]
−
** [http://www.uniprot.org/uniprot/P55100 P55100]
+
** [http://www.uniprot.org/uniprot/Q9RLE2 Q9RLE2]
−
** [http://www.uniprot.org/uniprot/Q39659 Q39659]
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/P00348 P00348]
+
{{#set: common name=ketopantoate_hydroxymethyltransferase}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: ec number=EC-2.1.2.11}}
−
{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
+
{{#set: gene associated=Tiso_gene_14465|Tiso_gene_14466}}
−
{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
+
{{#set: in pathway=PANTO-PWY}}
−
{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: ec number=EC-1.1.1.35}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: gene associated=Tiso_gene_14027|Tiso_gene_14026|Tiso_gene_18839|Tiso_gene_18838|Tiso_gene_5857|Tiso_gene_14262}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: in pathway=PWY-5136|PWY-7007|FAO-PWY|PWY66-391}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 20:16, 21 March 2018

Reaction 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • ketopantoate_hydroxymethyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PANTO-PWY, phosphopantothenate biosynthesis I: PANTO-PWY
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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