Difference between revisions of "PROTOPORPHYRINOGEN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15261 RXN-15261] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydropterin deaminase **...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PROTOPORPHYRINOGEN PROTOPORPHYRINOGEN] == * smiles: ** C=CC1(=C5(NC(=C1C)CC2(=C(C(=C(N2)CC3(NC(...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15261 RXN-15261] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PROTOPORPHYRINOGEN PROTOPORPHYRINOGEN] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C=CC1(=C5(NC(=C1C)CC2(=C(C(=C(N2)CC3(NC(=C(C=3CCC([O-])=O)C)CC4(=C(C(=C(N4)C5)C)C=C)))CCC(=O)[O-])C)))
 
* common name:
 
* common name:
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** dihydropterin deaminase
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** protoporphyrinogen IX
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** ORF
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* inchi key:
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* ec number:
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** InChIKey=UHSGPDMIQQYNAX-UHFFFAOYSA-L
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** [http://enzyme.expasy.org/EC/3.5.4.3 EC-3.5.4.3]
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* molecular weight:
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** 566.699   
 
* Synonym(s):
 
* Synonym(s):
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** protoporphyrinogen
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[PROTOPORGENOXI-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[CPD0-1718]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[CPD-16458]][c]
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* [[PPPGO]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 H+[c] '''+''' 1 7,8-dihydropterin[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 7,8-dihydrolumazine[c]
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* [[RXN0-1461]]
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* [[HEMN-RXN]]
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== Genes associated with this reaction  ==
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== Reaction(s) of unknown directionality ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_12280]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-7442]], drosopterin and aurodrosopterin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7442 PWY-7442]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* CAS : 7412-77-3
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{{#set: common name=dihydropterin deaminase}}
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* BIGG : pppg9
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{{#set: common name=ORF}}
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* PUBCHEM:
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{{#set: ec number=EC-3.5.4.3}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=20849104 20849104]
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{{#set: gene associated=Tiso_gene_12280}}
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* HMDB : HMDB01097
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{{#set: in pathway=PWY-7442}}
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* LIGAND-CPD:
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{{#set: reconstruction category=annotation}}
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** [http://www.genome.jp/dbget-bin/www_bget?C01079 C01079]
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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* CHEMSPIDER:
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{{#set: reconstruction tool=pathwaytools}}
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** [http://www.chemspider.com/Chemical-Structure.20171538.html 20171538]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57307 57307]
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* METABOLIGHTS : MTBLC57307
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{{#set: smiles=C=CC1(=C5(NC(=C1C)CC2(=C(C(=C(N2)CC3(NC(=C(C=3CCC([O-])=O)C)CC4(=C(C(=C(N4)C5)C)C=C)))CCC(=O)[O-])C)))}}
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{{#set: common name=protoporphyrinogen IX}}
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{{#set: inchi key=InChIKey=UHSGPDMIQQYNAX-UHFFFAOYSA-L}}
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{{#set: molecular weight=566.699    }}
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{{#set: common name=protoporphyrinogen}}
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{{#set: consumed by=PROTOPORGENOXI-RXN|PPPGO}}
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{{#set: produced by=RXN0-1461|HEMN-RXN}}

Latest revision as of 20:16, 21 March 2018

Metabolite PROTOPORPHYRINOGEN

  • smiles:
    • C=CC1(=C5(NC(=C1C)CC2(=C(C(=C(N2)CC3(NC(=C(C=3CCC([O-])=O)C)CC4(=C(C(=C(N4)C5)C)C=C)))CCC(=O)[O-])C)))
  • common name:
    • protoporphyrinogen IX
  • inchi key:
    • InChIKey=UHSGPDMIQQYNAX-UHFFFAOYSA-L
  • molecular weight:
    • 566.699
  • Synonym(s):
    • protoporphyrinogen

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 7412-77-3
  • BIGG : pppg9
  • PUBCHEM:
  • HMDB : HMDB01097
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC57307
"C=CC1(=C5(NC(=C1C)CC2(=C(C(=C(N2)CC3(NC(=C(C=3CCC([O-])=O)C)CC4(=C(C(=C(N4)C5)C)C=C)))CCC(=O)[O-])C)))" cannot be used as a page name in this wiki.




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