Difference between revisions of "RXN-17793"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_3788 == * right end position: ** 15495 * transcription direction: ** POSITIVE * left end position: ** 13412 * centisome position: ** 83.621...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17793 RXN-17793] == * direction: ** LEFT-TO-RIGHT * common name: ** hydroxyacyl-coenzyme_a_mito...")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_3788 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17793 RXN-17793] ==
−
* right end position:
+
* direction:
−
** 15495
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** hydroxyacyl-coenzyme_a_mitochondrial
−
* left end position:
+
** 3-hydroxyacyl-_dehydrogenase
−
** 13412
+
** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
−
* centisome position:
+
* ec number:
−
** 83.62118   
+
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[GLYCINE--TRNA-LIGASE-RXN]]
+
* With identifiers:
 +
** 1 [[CPD-19161]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-19154]][c]
 +
* With common name(s):
 +
** 1 (2E,7Z)-tetradecenoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 (S)-3-hydroxy-(7Z)-tetradecenoyl-CoA[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_5857]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: ec-number
+
*** Assignment: EC-NUMBER
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
−
*** Assignment: ec-number
+
*** Assignment: EC-NUMBER
−
== Pathways associated ==
+
* Gene: [[Tiso_gene_18838]]
−
* [[TRNA-CHARGING-PWY]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_14026]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_14262]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_18839]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: right end position=15495}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: transcription direction=POSITIVE}}
+
{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
−
{{#set: left end position=13412}}
+
{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
−
{{#set: centisome position=83.62118    }}
+
{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
−
{{#set: reaction associated=GLYCINE--TRNA-LIGASE-RXN}}
+
{{#set: ec number=EC-1.1.1.35}}
−
{{#set: pathway associated=TRNA-CHARGING-PWY}}
+
{{#set: gene associated=Tiso_gene_5857|Tiso_gene_18838|Tiso_gene_14026|Tiso_gene_14262|Tiso_gene_18839}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:17, 21 March 2018

Reaction RXN-17793

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • hydroxyacyl-coenzyme_a_mitochondrial
    • 3-hydroxyacyl-_dehydrogenase
    • hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (2E,7Z)-tetradecenoyl-CoA[c] + 1 H2O[c] => 1 (S)-3-hydroxy-(7Z)-tetradecenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17793&oldid=40607"