Difference between revisions of "PWY-6491"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1404 RXN-1404] == * direction: ** LEFT-TO-RIGHT * common name: ** nitrilase * ec number: ** [ht...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6491 PWY-6491] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1404 RXN-1404] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6491 PWY-6491] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
* common name:
 
* common name:
** nitrilase
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** D-galacturonate degradation III
* ec number:
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** [http://enzyme.expasy.org/EC/3.5.5.1 EC-3.5.5.1]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''1''' reactions found over '''6''' reactions in the full pathway
** 1 [[INDOLEYL-CPD]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[INDOLE_ACETATE_AUXIN]][c] '''+''' 1 [[AMMONIUM]][c]
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* [[RXN-11382]]
* With common name(s):
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** 0 associated gene:
** 1 indole-3-acetonitrile[c] '''+''' 2 H2O[c] '''=>''' 1 indole-3-acetate[c] '''+''' 1 ammonium[c]
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** 1 reconstruction source(s) associated:
 
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*** [[annotation-in-silico_annotation]]
== Genes associated with this reaction  ==
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== Reaction(s) not found ==
Genes have been associated with this reaction based on different elements listed below.
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11151 RXN-11151]
* [[Tiso_gene_10996]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11380 RXN-11380]
** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11381 RXN-11381]
***AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11383 RXN-11383]
** [[pantograph]]-[[athaliana]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14753 RXN-14753]
** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-581]], indole-3-acetate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581]
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** '''3''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-5026]], indole-3-acetate biosynthesis V (bacteria and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5026 PWY-5026]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWYQT-4476]], indole glucosinolate activation (herbivore attack): [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4476 PWYQT-4476]
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** '''1''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: taxonomic range=TAX-4751}}
** [http://www.genome.jp/dbget-bin/www_bget?R03093 R03093]
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{{#set: common name=D-galacturonate degradation III}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=1}}
{{#set: common name=nitrilase}}
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{{#set: total reaction=6}}
{{#set: ec number=EC-3.5.5.1}}
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{{#set: completion rate=17.0}}
{{#set: gene associated=Tiso_gene_10996}}
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{{#set: in pathway=PWY-581|PWY-5026|PWYQT-4476}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:17, 21 March 2018

Pathway PWY-6491

  • taxonomic range:
  • common name:
    • D-galacturonate degradation III
  • Synonym(s):

Reaction(s) found

1 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links