Difference between revisions of "RXN-646"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACYLYLCOA-HYDROXY-RXN METHYLACYLYLCOA-HYDROXY-RXN] == * direction: ** REVERSIBLE * common nam...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-646 RXN-646] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3.5....")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACYLYLCOA-HYDROXY-RXN METHYLACYLYLCOA-HYDROXY-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-646 RXN-646] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** Methylacrylyl-CoA hydratase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
+
** [http://enzyme.expasy.org/EC/3.5.1.107 EC-3.5.1.107]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-12173]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[METHACRYLYL-COA]][c]
+
** 1 [[MALEAMATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MALEATE]][c] '''+''' 1 [[AMMONIUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (S)-3-hydroxy-isobutanoyl-CoA[c] '''<=>''' 1 H2O[c] '''+''' 1 methylacrylyl-CoA[c]
+
** 1 maleamate[c] '''+''' 1 H2O[c] '''=>''' 1 maleate[c] '''+''' 1 ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_14262]]
+
* Gene: [[Tiso_gene_14341]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-athaliana]]
−
* [[Tiso_gene_14257]]
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** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_5857]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_6885]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_16145]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
+
* [[PWY-6993]], nicotine degradation II (pyrrolidine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6993 PWY-6993]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-722]], nicotinate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-722 PWY-722]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5033]], nicotinate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5033 PWY-5033]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7128]], nicotine degradation III (VPP pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7128 PWY-7128]
 +
** '''1''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31175 31175]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27385 27385]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04224 R04224]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03540 R03540]
−
* UNIPROT:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/P21177 P21177]
+
{{#set: ec number=EC-3.5.1.107}}
−
** [http://www.uniprot.org/uniprot/Q08426 Q08426]
+
{{#set: gene associated=Tiso_gene_14341}}
−
** [http://www.uniprot.org/uniprot/O29814 O29814]
+
{{#set: in pathway=PWY-6993|PWY-722|PWY-5033|PWY-7128}}
−
** [http://www.uniprot.org/uniprot/O29299 O29299]
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/O34893 O34893]
+
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
−
** [http://www.uniprot.org/uniprot/O23520 O23520]
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/P76082 P76082]
+
−
** [http://www.uniprot.org/uniprot/P64016 P64016]
+
−
** [http://www.uniprot.org/uniprot/P07896 P07896]
+
−
** [http://www.uniprot.org/uniprot/O53419 O53419]
+
−
** [http://www.uniprot.org/uniprot/P94549 P94549]
+
−
** [http://www.uniprot.org/uniprot/Q13825 Q13825]
+
−
** [http://www.uniprot.org/uniprot/P45361 P45361]
+
−
** [http://www.uniprot.org/uniprot/P28793 P28793]
+
−
** [http://www.uniprot.org/uniprot/P14604 P14604]
+
−
** [http://www.uniprot.org/uniprot/P22414 P22414]
+
−
** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
+
−
** [http://www.uniprot.org/uniprot/P34559 P34559]
+
−
** [http://www.uniprot.org/uniprot/Q01373 Q01373]
+
−
** [http://www.uniprot.org/uniprot/P55100 P55100]
+
−
** [http://www.uniprot.org/uniprot/P53526 P53526]
+
−
** [http://www.uniprot.org/uniprot/Q39659 Q39659]
+
−
** [http://www.uniprot.org/uniprot/O52797 O52797]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=Methylacrylyl-CoA hydratase}}
+
−
{{#set: ec number=EC-4.2.1.17}}
+
−
{{#set: gene associated=Tiso_gene_14262|Tiso_gene_14257|Tiso_gene_5857|Tiso_gene_6885|Tiso_gene_16145}}
+
−
{{#set: in pathway=VALDEG-PWY}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:17, 21 March 2018

Reaction RXN-646

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 maleamate[c] + 1 H2O[c] => 1 maleate[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6993, nicotine degradation II (pyrrolidine pathway): PWY-6993
    • 2 reactions found over 11 reactions in the full pathway
  • PWY-722, nicotinate degradation I: PWY-722
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5033, nicotinate degradation II: PWY-5033
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7128, nicotine degradation III (VPP pathway): PWY-7128
    • 1 reactions found over 10 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-646&oldid=40630"