Difference between revisions of "RXN-16909"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=BENZOATE BENZOATE] == * smiles: ** C(C1(C=CC=CC=1))([O-])=O * common name: ** benzoate * inchi...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16909 RXN-16909] == * direction: ** LEFT-TO-RIGHT * common name: ** carbamoyl_phosphate_synthet...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=BENZOATE BENZOATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16909 RXN-16909] ==
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* smiles:
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* direction:
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** C(C1(C=CC=CC=1))([O-])=O
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** benzoate
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** carbamoyl_phosphate_synthetase
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* inchi key:
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** protein_pyr1-3
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** InChIKey=WPYMKLBDIGXBTP-UHFFFAOYSA-M
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* molecular weight:
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** 121.115   
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* Synonym(s):
 
* Synonym(s):
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** benzoic acid
 
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** benzenecarboxylic acid
 
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** phenylformic acid
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[BENZALDEHYDE-DEHYDROGENASE-NADP+-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''=>''' 1 [[CPD-18238]][c] '''+''' 1 [[ADP]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN]]
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** 1 ATP[c] '''+''' 1 hydrogencarbonate[c] '''=>''' 1 carboxyphosphate[c] '''+''' 1 ADP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_4976]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_4685]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_4975]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-7693]], guadinomine B biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7693 PWY-7693]
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** '''3''' reactions found over '''12''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 65-85-0
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=carbamoyl_phosphate_synthetase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=242 242]
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{{#set: common name=protein_pyr1-3}}
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* HMDB : HMDB01870
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{{#set: gene associated=Tiso_gene_4976|Tiso_gene_4685|Tiso_gene_4975}}
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* LIGAND-CPD:
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{{#set: in pathway=PWY-7693}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00180 C00180]
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{{#set: reconstruction category=annotation}}
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* CHEMSPIDER:
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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** [http://www.chemspider.com/Chemical-Structure.237.html 237]
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{{#set: reconstruction tool=pathwaytools}}
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16150 16150]
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* METABOLIGHTS : MTBLC16150
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{{#set: smiles=C(C1(C=CC=CC=1))([O-])=O}}
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{{#set: common name=benzoate}}
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{{#set: inchi key=InChIKey=WPYMKLBDIGXBTP-UHFFFAOYSA-M}}
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{{#set: molecular weight=121.115    }}
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{{#set: common name=benzoic acid|benzenecarboxylic acid|phenylformic acid}}
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{{#set: produced by=BENZALDEHYDE-DEHYDROGENASE-NADP+-RXN}}
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{{#set: reversible reaction associated=BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN}}
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Latest revision as of 20:17, 21 March 2018

Reaction RXN-16909

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • carbamoyl_phosphate_synthetase
    • protein_pyr1-3
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 hydrogencarbonate[c] => 1 carboxyphosphate[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7693, guadinomine B biosynthesis: PWY-7693
    • 3 reactions found over 12 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-16909&oldid=40638"