Difference between revisions of "Tiso gene 13682"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?obje...")
(Created page with "Category:Gene == Gene Tiso_gene_13682 == * right end position: ** 2763 * transcription direction: ** POSITIVE * left end position: ** 26 * centisome position: ** 0.4233149...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS] ==
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== Gene Tiso_gene_13682 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** 2763
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** POSITIVE
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* common name:
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* left end position:
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** glyoxylate cycle
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** 26
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* centisome position:
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** 0.4233149   
 
* Synonym(s):
 
* Synonym(s):
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** glyoxylate bypass
 
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** glyoxylate shunt
 
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''6''' reactions found over '''6''' reactions in the full pathway
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* Reaction: [[AMIDASE-RXN]]
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* [[ACONITATEDEHYDR-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 associated gene(s):
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*** Assignment: automated-name-match
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*** [[Tiso_gene_13007]]
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* Reaction: [[GUANIDINOBUTANAMIDE-NH3-RXN]]
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** 3 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Assignment: automated-name-match
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*** [[annotation-in-silico_annotation]]
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** Source: [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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* Reaction: [[PYRAZIN-RXN]]
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* [[ACONITATEHYDR-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 associated gene(s):
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*** Assignment: automated-name-match
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*** [[Tiso_gene_13007]]
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* Reaction: [[R311-RXN]]
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** 2 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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*** [[annotation-experimental_annotation]]
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* Reaction: [[RXN-14727]]
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* [[CITSYN-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 4 associated gene(s):
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*** Assignment: automated-name-match
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*** [[Tiso_gene_18030]]
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* Reaction: [[RXN-14728]]
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*** [[Tiso_gene_9601]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_9603]]
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*** Assignment: automated-name-match
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*** [[Tiso_gene_9602]]
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* Reaction: [[RXN-17608]]
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** 3 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Assignment: automated-name-match
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*** [[manual-primary_network]]
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* Reaction: [[RXNN-404]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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* [[ISOCIT-CLEAV-RXN]]
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*** Assignment: automated-name-match
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** 1 associated gene(s):
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== Pathways associated ==
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*** [[Tiso_gene_14008]]
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* [[PWY-581]]
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** 3 reconstruction source(s) associated:
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* [[PWY-5025]]
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*** [[annotation-experimental_annotation]]
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* [[PWY-3161]]
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*** [[annotation-in-silico_annotation]]
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* [[ARGDEG-V-PWY]]
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*** [[orthology-esiliculosus]]
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* [[PWY-7308]]
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* [[MALATE-DEH-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_1990]]
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*** [[Tiso_gene_2323]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[MALSYN-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_14377]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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* ECOCYC:
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{{#set: right end position=2763}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS]
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{{#set: transcription direction=POSITIVE}}
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* METACYC:
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{{#set: left end position=26}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS]
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{{#set: centisome position=0.4233149    }}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: reaction associated=AMIDASE-RXN|GUANIDINOBUTANAMIDE-NH3-RXN|PYRAZIN-RXN|R311-RXN|RXN-14727|RXN-14728|RXN-17608|RXNN-404}}
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{{#set: taxonomic range=TAX-2759}}
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{{#set: pathway associated=PWY-581|PWY-5025|PWY-3161|ARGDEG-V-PWY|PWY-7308}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=glyoxylate cycle}}
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{{#set: common name=glyoxylate bypass|glyoxylate shunt}}
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{{#set: reaction found=6}}
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{{#set: total reaction=6}}
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{{#set: completion rate=100.0}}
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Latest revision as of 20:17, 21 March 2018

Gene Tiso_gene_13682

  • right end position:
    • 2763
  • transcription direction:
    • POSITIVE
  • left end position:
    • 26
  • centisome position:
    • 0.4233149
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13682&oldid=40655"