Difference between revisions of "METHYLACYLYLCOA-HYDROXY-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TA...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACYLYLCOA-HYDROXY-RXN METHYLACYLYLCOA-HYDROXY-RXN] == * direction: ** REVERSIBLE * common nam...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACYLYLCOA-HYDROXY-RXN METHYLACYLYLCOA-HYDROXY-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-39119 TAX-39119]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-38254 TAX-38254]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-29197 TAX-29197]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-38410 TAX-38410]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5747 TAX-5747]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2864 TAX-2864]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-877183 TAX-877183]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2836 TAX-2836]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3027 TAX-3027]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2830 TAX-2830]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2833 TAX-2833]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2870 TAX-2870]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2825 TAX-2825]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* common name:
 
* common name:
−
** Calvin-Benson-Bassham cycle
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** Methylacrylyl-CoA hydratase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
−
** photosynthetic dark reactions
 
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** photosynthetic CO2 fixation
 
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** reductive pentose phosphate pathway
 
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** Calvin cycle
 
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** carbon fixation
 
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** Calvin-Benson cycle
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''13''' reaction(s) found
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* With identifiers:
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** [[F16BDEPHOS-RXN]]
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** 1 [[CPD-12173]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[METHACRYLYL-COA]][c]
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** [[1TRANSKETO-RXN]]
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* With common name(s):
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** [[PHOSPHORIBULOKINASE-RXN]]
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** 1 (S)-3-hydroxy-isobutanoyl-CoA[c] '''<=>''' 1 H2O[c] '''+''' 1 methylacrylyl-CoA[c]
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** [[SEDOHEPTULOSE-BISPHOSPHATASE-RXN]]
+
 
−
** [[RIBULP3EPIM-RXN]]
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== Genes associated with this reaction  ==
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** [[1.2.1.13-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[TRIOSEPISOMERIZATION-RXN]]
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* Gene: [[Tiso_gene_14262]]
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** [[RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN]]
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** Source: [[orthology-esiliculosus]]
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** [[F16ALDOLASE-RXN]]
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* Gene: [[Tiso_gene_14257]]
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** [[RIB5PISOM-RXN]]
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** Source: [[orthology-esiliculosus]]
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** [[2TRANSKETO-RXN]]
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* Gene: [[Tiso_gene_5857]]
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** [[SEDOBISALDOL-RXN]]
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** Source: [[orthology-athaliana]]
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** [[PHOSGLYPHOS-RXN]]
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** Source: [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* Gene: [[Tiso_gene_6885]]
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* '''0''' reaction(s) not found
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** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_16145]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PLANTCYC : CALVIN-PWY
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* RHEA:
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* ARACYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31175 31175]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-1117}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04224 R04224]
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{{#set: taxonomic range=TAX-39119}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-38254}}
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** [http://www.uniprot.org/uniprot/P21177 P21177]
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{{#set: taxonomic range=TAX-29197}}
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** [http://www.uniprot.org/uniprot/Q08426 Q08426]
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{{#set: taxonomic range=TAX-38410}}
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** [http://www.uniprot.org/uniprot/O29814 O29814]
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{{#set: taxonomic range=TAX-5747}}
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** [http://www.uniprot.org/uniprot/O29299 O29299]
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{{#set: taxonomic range=TAX-2864}}
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** [http://www.uniprot.org/uniprot/O34893 O34893]
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{{#set: taxonomic range=TAX-877183}}
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** [http://www.uniprot.org/uniprot/O23520 O23520]
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{{#set: taxonomic range=TAX-2836}}
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** [http://www.uniprot.org/uniprot/P76082 P76082]
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{{#set: taxonomic range=TAX-3027}}
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** [http://www.uniprot.org/uniprot/P64016 P64016]
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{{#set: taxonomic range=TAX-2830}}
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** [http://www.uniprot.org/uniprot/P07896 P07896]
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{{#set: taxonomic range=TAX-2833}}
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** [http://www.uniprot.org/uniprot/O53419 O53419]
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{{#set: taxonomic range=TAX-3041}}
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** [http://www.uniprot.org/uniprot/P94549 P94549]
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{{#set: taxonomic range=TAX-33682}}
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** [http://www.uniprot.org/uniprot/Q13825 Q13825]
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{{#set: taxonomic range=TAX-2763}}
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** [http://www.uniprot.org/uniprot/P45361 P45361]
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{{#set: taxonomic range=TAX-2870}}
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** [http://www.uniprot.org/uniprot/P28793 P28793]
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{{#set: taxonomic range=TAX-2825}}
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** [http://www.uniprot.org/uniprot/P14604 P14604]
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/P22414 P22414]
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
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{{#set: common name=Calvin-Benson-Bassham cycle}}
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** [http://www.uniprot.org/uniprot/P34559 P34559]
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{{#set: common name=photosynthetic dark reactions|photosynthetic CO2 fixation|reductive pentose phosphate pathway|Calvin cycle|carbon fixation|Calvin-Benson cycle}}
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** [http://www.uniprot.org/uniprot/Q01373 Q01373]
−
{{#set: reaction found=13}}
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** [http://www.uniprot.org/uniprot/P55100 P55100]
−
{{#set: reaction not found=0}}
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** [http://www.uniprot.org/uniprot/P53526 P53526]
 +
** [http://www.uniprot.org/uniprot/Q39659 Q39659]
 +
** [http://www.uniprot.org/uniprot/O52797 O52797]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Methylacrylyl-CoA hydratase}}
 +
{{#set: ec number=EC-4.2.1.17}}
 +
{{#set: gene associated=Tiso_gene_14262|Tiso_gene_14257|Tiso_gene_5857|Tiso_gene_6885|Tiso_gene_16145}}
 +
{{#set: in pathway=VALDEG-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:17, 21 March 2018

Reaction METHYLACYLYLCOA-HYDROXY-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Methylacrylyl-CoA hydratase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (S)-3-hydroxy-isobutanoyl-CoA[c] <=> 1 H2O[c] + 1 methylacrylyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • VALDEG-PWY, L-valine degradation I: VALDEG-PWY
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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