Difference between revisions of "PWY-6543"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TA...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6543 PWY-6543] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6543 PWY-6543] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-39119 TAX-39119]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-38254 TAX-38254]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-29197 TAX-29197]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-38410 TAX-38410]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5747 TAX-5747]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2864 TAX-2864]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-877183 TAX-877183]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2836 TAX-2836]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3027 TAX-3027]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2830 TAX-2830]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2833 TAX-2833]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2870 TAX-2870]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2825 TAX-2825]
+
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
−
** Calvin-Benson-Bassham cycle
+
** 4-aminobenzoate biosynthesis
 
* Synonym(s):
 
* Synonym(s):
−
** photosynthetic dark reactions
+
** pABA biosynthesis
−
** photosynthetic CO2 fixation
+
** plastidial PABA biosynthesis
−
** reductive pentose phosphate pathway
+
** PABA biosynthesis in plastids
−
** Calvin cycle
+
** p-aminobenzoate biosynthesis
−
** carbon fixation
+
−
** Calvin-Benson cycle
+
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''13''' reactions found over '''13''' reactions in the full pathway
+
  '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[1.2.1.13-RXN]]
+
* [[ADCLY-RXN]]
−
** 4 associated gene(s):
+
** 2 associated gene(s):
−
*** [[Tiso_gene_6766]]
+
*** [[Tiso_gene_17748]]
−
*** [[Tiso_gene_6765]]
+
*** [[Tiso_gene_614]]
−
*** [[Tiso_gene_20000]]
+
−
*** [[Tiso_gene_10646]]
+
 
** 3 reconstruction source(s) associated:
 
** 3 reconstruction source(s) associated:
−
*** [[annotation-experimental_annotation]]
 
−
*** [[manual-primary_network]]
 
−
*** [[annotation-in-silico_annotation]]
 
−
* [[1TRANSKETO-RXN]]
 
−
** 2 associated gene(s):
 
−
*** [[Tiso_gene_5008]]
 
−
*** [[Tiso_gene_11559]]
 
−
** 5 reconstruction source(s) associated:
 
−
*** [[annotation-experimental_annotation]]
 
 
*** [[orthology-athaliana]]
 
*** [[orthology-athaliana]]
−
*** [[annotation-in-silico_annotation]]
 
−
*** [[orthology-synechocystis]]
 
−
*** [[manual-primary_network]]
 
−
* [[2TRANSKETO-RXN]]
 
−
** 2 associated gene(s):
 
−
*** [[Tiso_gene_11559]]
 
−
*** [[Tiso_gene_5008]]
 
−
** 5 reconstruction source(s) associated:
 
−
*** [[annotation-experimental_annotation]]
 
−
*** [[orthology-athaliana]]
 
−
*** [[orthology-creinhardtii]]
 
−
*** [[manual-primary_network]]
 
−
*** [[annotation-in-silico_annotation]]
 
−
* [[F16ALDOLASE-RXN]]
 
−
** 6 associated gene(s):
 
−
*** [[Tiso_gene_65]]
 
−
*** [[Tiso_gene_9119]]
 
−
*** [[Tiso_gene_9179]]
 
−
*** [[Tiso_gene_12272]]
 
−
*** [[Tiso_gene_14568]]
 
−
*** [[Tiso_gene_9118]]
 
−
** 5 reconstruction source(s) associated:
 
−
*** [[annotation-in-silico_annotation]]
 
−
*** [[manual-primary_network]]
 
 
*** [[orthology-creinhardtii]]
 
*** [[orthology-creinhardtii]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
*** [[annotation-experimental_annotation]]
+
* [[PABASYN-RXN]]
−
* [[F16BDEPHOS-RXN]]
+
** 2 associated gene(s):
−
** 7 associated gene(s):
+
*** [[Tiso_gene_11176]]
−
*** [[Tiso_gene_16502]]
+
*** [[Tiso_gene_13939]]
−
*** [[Tiso_gene_8226]]
+
** 4 reconstruction source(s) associated:
−
*** [[Tiso_gene_9435]]
+
−
*** [[Tiso_gene_4904]]
+
−
*** [[Tiso_gene_3483]]
+
−
*** [[Tiso_gene_15398]]
+
−
*** [[Tiso_gene_4905]]
+
−
** 6 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
 
*** [[orthology-athaliana]]
 
*** [[orthology-athaliana]]
−
*** [[manual-primary_network]]
 
−
*** [[orthology-creinhardtii]]
 
−
* [[PHOSGLYPHOS-RXN]]
 
−
** 6 associated gene(s):
 
−
*** [[Tiso_gene_3527]]
 
−
*** [[Tiso_gene_18263]]
 
−
*** [[Tiso_gene_12104]]
 
−
*** [[Tiso_gene_3526]]
 
−
*** [[Tiso_gene_14642]]
 
−
*** [[Tiso_gene_18264]]
 
−
** 7 reconstruction source(s) associated:
 
−
*** [[annotation-experimental_annotation]]
 
−
*** [[orthology-esiliculosus]]
 
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
−
*** [[orthology-athaliana]]
 
 
*** [[orthology-synechocystis]]
 
*** [[orthology-synechocystis]]
−
*** [[manual-primary_network]]
 
−
*** [[orthology-creinhardtii]]
 
−
* [[PHOSPHORIBULOKINASE-RXN]]
 
−
** 1 associated gene(s):
 
−
*** [[Tiso_gene_17637]]
 
−
** 7 reconstruction source(s) associated:
 
−
*** [[annotation-experimental_annotation]]
 
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
*** [[annotation-in-silico_annotation]]
 
−
*** [[orthology-athaliana]]
 
−
*** [[orthology-synechocystis]]
 
−
*** [[manual-primary_network]]
 
−
*** [[orthology-creinhardtii]]
 
−
* [[RIB5PISOM-RXN]]
 
−
** 1 associated gene(s):
 
−
*** [[Tiso_gene_18217]]
 
−
** 5 reconstruction source(s) associated:
 
−
*** [[orthology-athaliana]]
 
−
*** [[annotation-in-silico_annotation]]
 
−
*** [[orthology-synechocystis]]
 
−
*** [[orthology-esiliculosus]]
 
−
*** [[manual-primary_network]]
 
−
* [[RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN]]
 
−
** 1 associated gene(s):
 
−
*** [[Tiso_gene_12199]]
 
−
** 2 reconstruction source(s) associated:
 
−
*** [[manual-primary_network]]
 
−
*** [[orthology-esiliculosus]]
 
−
* [[RIBULP3EPIM-RXN]]
 
−
** 3 associated gene(s):
 
−
*** [[Tiso_gene_4754]]
 
−
*** [[Tiso_gene_19140]]
 
−
*** [[Tiso_gene_10879]]
 
−
** 7 reconstruction source(s) associated:
 
−
*** [[annotation-experimental_annotation]]
 
−
*** [[orthology-esiliculosus]]
 
−
*** [[annotation-in-silico_annotation]]
 
−
*** [[orthology-athaliana]]
 
−
*** [[orthology-synechocystis]]
 
−
*** [[manual-primary_network]]
 
−
*** [[orthology-creinhardtii]]
 
−
* [[SEDOBISALDOL-RXN]]
 
−
** 4 associated gene(s):
 
−
*** [[Tiso_gene_9179]]
 
−
*** [[Tiso_gene_12272]]
 
−
*** [[Tiso_gene_14568]]
 
−
*** [[Tiso_gene_65]]
 
−
** 4 reconstruction source(s) associated:
 
−
*** [[orthology-athaliana]]
 
−
*** [[orthology-creinhardtii]]
 
−
*** [[orthology-synechocystis]]
 
−
*** [[manual-primary_network]]
 
−
* [[SEDOHEPTULOSE-BISPHOSPHATASE-RXN]]
 
−
** 4 associated gene(s):
 
−
*** [[Tiso_gene_8226]]
 
−
*** [[Tiso_gene_4905]]
 
−
*** [[Tiso_gene_16502]]
 
−
*** [[Tiso_gene_9435]]
 
−
** 6 reconstruction source(s) associated:
 
−
*** [[annotation-experimental_annotation]]
 
−
*** [[orthology-esiliculosus]]
 
−
*** [[annotation-in-silico_annotation]]
 
−
*** [[orthology-athaliana]]
 
−
*** [[manual-primary_network]]
 
−
*** [[orthology-creinhardtii]]
 
−
* [[TRIOSEPISOMERIZATION-RXN]]
 
−
** 4 associated gene(s):
 
−
*** [[Tiso_gene_20000]]
 
−
*** [[Tiso_gene_19961]]
 
−
*** [[Tiso_gene_10646]]
 
−
*** [[Tiso_gene_19962]]
 
−
** 7 reconstruction source(s) associated:
 
−
*** [[annotation-experimental_annotation]]
 
−
*** [[orthology-esiliculosus]]
 
−
*** [[annotation-in-silico_annotation]]
 
−
*** [[orthology-athaliana]]
 
−
*** [[orthology-synechocystis]]
 
−
*** [[manual-primary_network]]
 
−
*** [[orthology-creinhardtii]]
 
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
−
* PLANTCYC : CALVIN-PWY
+
* ECOCYC:
−
* ARACYC:
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6543 PWY-6543]
−
** [http://metacyc.org/ARA/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
+
{{#set: taxonomic range=TAX-4751}}
−
{{#set: taxonomic range=TAX-1117}}
+
{{#set: taxonomic range=TAX-2157}}
−
{{#set: taxonomic range=TAX-39119}}
+
−
{{#set: taxonomic range=TAX-38254}}
+
−
{{#set: taxonomic range=TAX-29197}}
+
−
{{#set: taxonomic range=TAX-38410}}
+
−
{{#set: taxonomic range=TAX-5747}}
+
−
{{#set: taxonomic range=TAX-2864}}
+
−
{{#set: taxonomic range=TAX-877183}}
+
−
{{#set: taxonomic range=TAX-2836}}
+
−
{{#set: taxonomic range=TAX-3027}}
+
−
{{#set: taxonomic range=TAX-2830}}
+
−
{{#set: taxonomic range=TAX-2833}}
+
−
{{#set: taxonomic range=TAX-3041}}
+
−
{{#set: taxonomic range=TAX-33682}}
+
−
{{#set: taxonomic range=TAX-2763}}
+
−
{{#set: taxonomic range=TAX-2870}}
+
−
{{#set: taxonomic range=TAX-2825}}
+
 
{{#set: taxonomic range=TAX-2}}
 
{{#set: taxonomic range=TAX-2}}
 
{{#set: taxonomic range=TAX-33090}}
 
{{#set: taxonomic range=TAX-33090}}
−
{{#set: common name=Calvin-Benson-Bassham cycle}}
+
{{#set: common name=4-aminobenzoate biosynthesis}}
−
{{#set: common name=photosynthetic dark reactions|photosynthetic CO2 fixation|reductive pentose phosphate pathway|Calvin cycle|carbon fixation|Calvin-Benson cycle}}
+
{{#set: common name=pABA biosynthesis|plastidial PABA biosynthesis|PABA biosynthesis in plastids|p-aminobenzoate biosynthesis}}
−
{{#set: reaction found=13}}
+
{{#set: reaction found=2}}
−
{{#set: total reaction=13}}
+
{{#set: total reaction=2}}
 
{{#set: completion rate=100.0}}
 
{{#set: completion rate=100.0}}

Latest revision as of 19:17, 21 March 2018

Pathway PWY-6543

  • taxonomic range:
  • common name:
    • 4-aminobenzoate biosynthesis
  • Synonym(s):
    • pABA biosynthesis
    • plastidial PABA biosynthesis
    • PABA biosynthesis in plastids
    • p-aminobenzoate biosynthesis

Reaction(s) found

2 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6543&oldid=40662"