Difference between revisions of "RXN-14209"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1404 RXN-1404] == * direction: ** LEFT-TO-RIGHT * common name: ** nitrilase * ec number: ** [ht...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14209 RXN-14209] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/1.2...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1404 RXN-1404] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14209 RXN-14209] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** nitrilase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.5.1 EC-3.5.5.1]
+
** [http://enzyme.expasy.org/EC/1.2.1 EC-1.2.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[INDOLEYL-CPD]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[INDOLE_ACETATE_AUXIN]][c] '''+''' 1 [[AMMONIUM]][c]
+
** 1 [[NADP]][c] '''+''' 1 [[4-AMINO-BUTYRALDEHYDE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[4-AMINO-BUTYRATE]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[NADPH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 indole-3-acetonitrile[c] '''+''' 2 H2O[c] '''=>''' 1 indole-3-acetate[c] '''+''' 1 ammonium[c]
+
** 1 NADP+[c] '''+''' 1 4-aminobutanal[c] '''+''' 1 H2O[c] '''<=>''' 1 4-aminobutanoate[c] '''+''' 2 H+[c] '''+''' 1 NADPH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10996]]
+
* Gene: [[Tiso_gene_7322]]
−
** IN-SILICO_ANNOTATION
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** Source: [[orthology-athaliana]]
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***AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[athaliana]]
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* Gene: [[Tiso_gene_3513]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-athaliana]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-581]], indole-3-acetate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581]
 
−
** '''3''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5026]], indole-3-acetate biosynthesis V (bacteria and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5026 PWY-5026]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWYQT-4476]], indole glucosinolate activation (herbivore attack): [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4476 PWYQT-4476]
 
−
** '''1''' reactions found over '''13''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-athaliana]]
−
*** [[athaliana]]
+
*** Tool: [[pantograph]]
−
*** [[esiliculosus]]
+
** Source: [[orthology-esiliculosus]]
−
* [[annotation]]:
+
*** Tool: [[pantograph]]
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30806 30806]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03093 R03093]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01986 R01986]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=nitrilase}}
+
{{#set: ec number=EC-1.2.1}}
−
{{#set: ec number=EC-3.5.5.1}}
+
{{#set: gene associated=Tiso_gene_7322|Tiso_gene_3513}}
−
{{#set: gene associated=Tiso_gene_10996}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=PWY-581|PWY-5026|PWYQT-4476}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=athaliana|esiliculosus}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 20:17, 21 March 2018

Reaction RXN-14209

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-14209&oldid=40673"