Difference between revisions of "RXN-12968"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=O-SUCCINYL-L-HOMOSERINE O-SUCCINYL-L-HOMOSERINE] == * smiles: ** C(CC(=O)OCCC(C([O-])=O)[N+])C(...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12968 RXN-12968] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=O-SUCCINYL-L-HOMOSERINE O-SUCCINYL-L-HOMOSERINE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12968 RXN-12968] ==
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* smiles:
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* direction:
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** C(CC(=O)OCCC(C([O-])=O)[N+])C([O-])=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=GNISQJGXJIDKDJ-YFKPBYRVSA-M
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* common name:
 
* common name:
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** O-succinyl-L-homoserine
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** chloroplast_beta-keto_acyl_reductase
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* molecular weight:
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* ec number:
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** 218.186   
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
 
* Synonym(s):
 
* Synonym(s):
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** O-succinyl-homoserine
 
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** succinyl-homoserine
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[SUCHMSSELCYSLh]]
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* With identifiers:
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* [[METBALT-RXN]]
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** 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[CPD-14404]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[CPD-14405]][c]
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* [[SUCHMSSELCYSL]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 NAD(P)H[c] '''+''' 1 3-oxo-dihomo γ-linolenoyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 NAD(P)+[c] '''+''' 1 3R-hydroxy-dihomo γ-linolenoyl-CoA[c]
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== Reaction(s) of unknown directionality ==
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* [[O-SUCCHOMOSERLYASE-RXN]]
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== Genes associated with this reaction  ==
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* [[RXN-9384]]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_9871]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-5353]], arachidonate biosynthesis I (6-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5353 PWY-5353]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7592]], arachidonate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7592 PWY-7592]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 1492-23-5
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=46878420 46878420]
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{{#set: ec number=EC-1.1.1.330}}
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* CHEBI:
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{{#set: gene associated=Tiso_gene_9871}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57661 57661]
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{{#set: in pathway=PWY-5353|PWY-7592}}
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* BIGG : suchms
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{{#set: reconstruction category=annotation}}
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* LIGAND-CPD:
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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** [http://www.genome.jp/dbget-bin/www_bget?C01118 C01118]
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: smiles=C(CC(=O)OCCC(C([O-])=O)[N+])C([O-])=O}}
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{{#set: inchi key=InChIKey=GNISQJGXJIDKDJ-YFKPBYRVSA-M}}
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{{#set: common name=O-succinyl-L-homoserine}}
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{{#set: molecular weight=218.186    }}
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{{#set: common name=O-succinyl-homoserine|succinyl-homoserine}}
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{{#set: consumed by=SUCHMSSELCYSLh|METBALT-RXN|SUCHMSSELCYSL}}
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{{#set: consumed or produced by=O-SUCCHOMOSERLYASE-RXN|RXN-9384}}
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Latest revision as of 20:17, 21 March 2018

Reaction RXN-12968

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • chloroplast_beta-keto_acyl_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD(P)H[c] + 1 3-oxo-dihomo γ-linolenoyl-CoA[c] + 1 H+[c] => 1 NAD(P)+[c] + 1 3R-hydroxy-dihomo γ-linolenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5353, arachidonate biosynthesis I (6-desaturase, lower eukaryotes): PWY-5353
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-7592, arachidonate biosynthesis III (6-desaturase, mammals): PWY-7592
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12968&oldid=40683"