Difference between revisions of "DARABCATK12-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15513 RXN-15513] == * direction: ** REVERSIBLE * common name: ** ORF ** plastid_phosphoglycerat...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=DARABCATK12-PWY DARABCATK12-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=T...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15513 RXN-15513] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=DARABCATK12-PWY DARABCATK12-PWY] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** ORF
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** D-arabinose degradation I
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** plastid_phosphoglycerate_mutase_protein
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** phosphoglycerate_mutase
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** bisphosphoglycerate-dependent_phosphoglycerate_mutase
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* ec number:
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** [http://enzyme.expasy.org/EC/5.4.2.11 EC-5.4.2.11]
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* Synonym(s):
 
* Synonym(s):
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** D-arabinose catabolism
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''4''' reactions in the full pathway
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** 1 [[2-PG]][c] '''<=>''' 1 [[G3P]][c]
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* [[GLYCOLALD-DEHYDROG-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 2-phospho-D-glycerate[c] '''<=>''' 1 3-phospho-D-glycerate[c]
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*** [[Tiso_gene_7322]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-synechocystis]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* [[Tiso_gene_14664]]
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* [http://metacyc.org/META/NEW-IMAGE?object=DARABALDOL-RXN DARABALDOL-RXN]
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=DARABISOM-RXN DARABISOM-RXN]
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=DARABKIN-RXN DARABKIN-RXN]
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* [[Tiso_gene_14530]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16271]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_2841]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7201]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9923]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_2365]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9922]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-1622]], formaldehyde assimilation I (serine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622]
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** '''5''' reactions found over '''13''' reactions in the full pathway
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* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS]
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** '''12''' reactions found over '''12''' reactions in the full pathway
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* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
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** '''14''' reactions found over '''18''' reactions in the full pathway
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* [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484]
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** '''11''' reactions found over '''11''' reactions in the full pathway
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* [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399]
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** '''10''' reactions found over '''12''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=REVERSIBLE}}
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* ECOCYC:
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{{#set: common name=ORF}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=DARABCATK12-PWY DARABCATK12-PWY]
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{{#set: common name=plastid_phosphoglycerate_mutase_protein}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=phosphoglycerate_mutase}}
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{{#set: common name=D-arabinose degradation I}}
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{{#set: common name=bisphosphoglycerate-dependent_phosphoglycerate_mutase}}
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{{#set: common name=D-arabinose catabolism}}
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{{#set: ec number=EC-5.4.2.11}}
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{{#set: reaction found=1}}
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{{#set: gene associated=Tiso_gene_14664|Tiso_gene_14530|Tiso_gene_16271|Tiso_gene_2841|Tiso_gene_7201|Tiso_gene_9923|Tiso_gene_2365|Tiso_gene_9922}}
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{{#set: total reaction=4}}
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{{#set: in pathway=PWY-1622|GLYCOLYSIS|ANAGLYCOLYSIS-PWY|P122-PWY|PWY-5484|PWY66-399}}
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{{#set: completion rate=25.0}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:17, 21 March 2018

Pathway DARABCATK12-PWY

  • taxonomic range:
  • common name:
    • D-arabinose degradation I
  • Synonym(s):
    • D-arabinose catabolism

Reaction(s) found

1 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=DARABCATK12-PWY&oldid=40684"