Difference between revisions of "PWY-5353"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14209 RXN-14209] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/1.2...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5353 PWY-5353] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14209 RXN-14209] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5353 PWY-5353] ==
* direction:
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* taxonomic range:
** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
** [http://enzyme.expasy.org/EC/1.2.1 EC-1.2.1]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3208 TAX-3208]
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* common name:
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** arachidonate biosynthesis I (6-desaturase, lower eukaryotes)
 
* Synonym(s):
 
* Synonym(s):
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** arachidonic acid biosynthesis I (lower eukaryotes)
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''3''' reactions found over '''8''' reactions in the full pathway
** 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[4-AMINO-BUTYRALDEHYDE]][c] '''<=>''' 1 [[4-AMINO-BUTYRATE]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[NADPH]][c]
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* [[RXN-11680]]
* With common name(s):
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** 5 associated gene(s):
** 1 NADP+[c] '''+''' 1 H2O[c] '''+''' 1 4-aminobutanal[c] '''<=>''' 1 4-aminobutanoate[c] '''+''' 2 H+[c] '''+''' 1 NADPH[c]
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*** [[Tiso_gene_9580]]
 
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*** [[Tiso_gene_8027]]
== Genes associated with this reaction  ==
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*** [[Tiso_gene_18205]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_18056]]
* [[Tiso_gene_3513]]
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*** [[Tiso_gene_7427]]
** [[pantograph]]-[[athaliana]]
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** 2 reconstruction source(s) associated:
* [[Tiso_gene_7322]]
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*** [[annotation-in-silico_annotation]]
** [[pantograph]]-[[athaliana]]
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*** [[orthology-esiliculosus]]
** [[pantograph]]-[[esiliculosus]]
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* [[RXN-12968]]
== Pathways  ==
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** 1 associated gene(s):
== Reconstruction information  ==
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*** [[Tiso_gene_9871]]
* [[orthology]]:
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** 2 reconstruction source(s) associated:
** [[pantograph]]:
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*** [[annotation-in-silico_annotation]]
*** [[athaliana]]
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*** [[annotation-experimental_annotation]]
*** [[esiliculosus]]
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* [[RXN-8346]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12777 RXN-12777]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12969 RXN-12969]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12971 RXN-12971]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16043 RXN-16043]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16044 RXN-16044]
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-4751}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30806 30806]
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{{#set: taxonomic range=TAX-3041}}
* LIGAND-RXN:
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{{#set: taxonomic range=TAX-3208}}
** [http://www.genome.jp/dbget-bin/www_bget?R01986 R01986]
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{{#set: common name=arachidonate biosynthesis I (6-desaturase, lower eukaryotes)}}
{{#set: direction=REVERSIBLE}}
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{{#set: common name=arachidonic acid biosynthesis I (lower eukaryotes)}}
{{#set: ec number=EC-1.2.1}}
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{{#set: reaction found=3}}
{{#set: gene associated=Tiso_gene_3513|Tiso_gene_7322}}
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{{#set: total reaction=8}}
{{#set: in pathway=}}
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{{#set: completion rate=38.0}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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Latest revision as of 20:17, 21 March 2018

Pathway PWY-5353

  • taxonomic range:
  • common name:
    • arachidonate biosynthesis I (6-desaturase, lower eukaryotes)
  • Synonym(s):
    • arachidonic acid biosynthesis I (lower eukaryotes)

Reaction(s) found

3 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links