Difference between revisions of "3.1.13.1-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_9490 == * left end position: ** 4162 * transcription direction: ** POSITIVE * right end position: ** 4313 * centisome position: ** 44.77194...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.13.1-RXN 3.1.13.1-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** exosome_complex_exonu...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_9490 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.13.1-RXN 3.1.13.1-RXN] ==
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* left end position:
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* direction:
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** 4162
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** exosome_complex_exonuclease
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* right end position:
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* ec number:
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** 4313
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** [http://enzyme.expasy.org/EC/3.1.13.1 EC-3.1.13.1]
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* centisome position:
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** 44.771946   
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* Synonym(s):
 
* Synonym(s):
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** Ribonuclease II
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ADENYLYLSULFKIN-RXN]]
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* With identifiers:
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** [[pantograph]]-[[synechocystis]]
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** n [[WATER]][c] '''+''' 1 [[RNASE-II-DEGRADATION-SUBSTRATE-MRNA]][c] '''=>''' n [[Nucleoside-Monophosphates]][c]
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* [[INORGPYROPHOSPHAT-RXN]]
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* With common name(s):
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** in-silico_annotation
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** n H2O[c] '''+''' 1 RNase II degradation substrate mRNA[c] '''=>''' n a nucleoside 5'-monophosphate[c]
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***ec-number
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** [[pantograph]]-[[athaliana]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[synechocystis]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[esiliculosus]]
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* Gene: [[Tiso_gene_11613]]
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** [[pantograph]]-[[creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[creinhardtii]]
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*** Assignment: EC-NUMBER
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== Pathways associated ==
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* Gene: [[Tiso_gene_11612]]
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* [[PWY-7805]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-7807]]
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*** Assignment: EC-NUMBER
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* [[PWY-5340]]
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== Pathways ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=4162}}
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* UNIPROT:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/P30850 P30850]
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{{#set: right end position=4313}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=44.771946    }}
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{{#set: common name=exosome_complex_exonuclease}}
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{{#set: reaction associated=ADENYLYLSULFKIN-RXN|INORGPYROPHOSPHAT-RXN}}
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{{#set: ec number=EC-3.1.13.1}}
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{{#set: pathway associated=PWY-7805|PWY-7807|PWY-5340}}
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{{#set: common name=Ribonuclease II}}
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{{#set: gene associated=Tiso_gene_11613|Tiso_gene_11612}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:19, 21 March 2018

Reaction 3.1.13.1-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • exosome_complex_exonuclease
  • ec number:
  • Synonym(s):
    • Ribonuclease II

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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