Difference between revisions of "RXN-10660"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-241806 TAX-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10660 RXN-10660] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyacyl-[acyl-carrier...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10660 RXN-10660] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-241806 TAX-241806]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3312 TAX-3312]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3208 TAX-3208]
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* common name:
 
* common name:
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** 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)
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** 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
 
* Synonym(s):
 
* Synonym(s):
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** light-independent aerobic 3,8-divinyl-chlorophyllide a biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''8''' reactions found over '''9''' reactions in the full pathway
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* With identifiers:
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* [[PROTOPORGENOXI-RXN]]
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** 1 [[3-hydroxy-cis-D9-hexaecenoyl-ACPs]][c] '''=>''' 1 [[Trans-D3-cis-D9-hexadecenoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_11986]]
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** 1 a (3R)-3-hydroxy cis Δ9-hexadecenoyl-[acp][c] '''=>''' 1 a trans-Δ3-cis-Δ9-hexadecenoyl-[acp][c] '''+''' 1 H2O[c]
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*** [[Tiso_gene_15401]]
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** 6 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_6884]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[orthology-synechocystis]]
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== Pathways  ==
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*** [[manual-primary_network]]
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* [[PWY-6282]], palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6282 PWY-6282]
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* [[RXN-5282]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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** 0 associated gene:
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== Reconstruction information  ==
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** 1 reconstruction source(s) associated:
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* Category: [[annotation]]
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*** [[manual-primary_network]]
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** Source: [[annotation-experimental_annotation]]
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* [[RXN-5283]]
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*** Tool: [[pathwaytools]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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* [[RXN-5284]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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* [[RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_19451]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[RXN0-1461]]
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** 5 associated gene(s):
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*** [[Tiso_gene_2247]]
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*** [[Tiso_gene_2246]]
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*** [[Tiso_gene_13364]]
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*** [[Tiso_gene_13365]]
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*** [[Tiso_gene_3671]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[RXN1F-20]]
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** 3 associated gene(s):
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*** [[Tiso_gene_9870]]
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*** [[Tiso_gene_11960]]
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*** [[Tiso_gene_5993]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[orthology-esiliculosus]]
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* [[UROGENDECARBOX-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_18743]]
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*** [[Tiso_gene_19684]]
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*** [[Tiso_gene_18744]]
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*** [[Tiso_gene_5173]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17485 RXN-17485]
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== External links  ==
 
== External links  ==
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* PLANTCYC : PWY-7159
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-241806}}
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{{#set: common name=3-hydroxyacyl-[acyl-carrier-protein] dehydratase}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: ec number=EC-4.2.1.59}}
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{{#set: taxonomic range=TAX-1117}}
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{{#set: gene associated=Tiso_gene_6884}}
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{{#set: taxonomic range=TAX-3041}}
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{{#set: in pathway=PWY-6282}}
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{{#set: taxonomic range=TAX-3312}}
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{{#set: reconstruction category=annotation}}
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{{#set: taxonomic range=TAX-3208}}
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{{#set: reconstruction source=annotation-experimental_annotation}}
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{{#set: common name=3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=light-independent aerobic 3,8-divinyl-chlorophyllide a biosynthesis}}
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{{#set: reaction found=8}}
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{{#set: total reaction=9}}
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{{#set: completion rate=89.0}}
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Latest revision as of 20:19, 21 March 2018

Reaction RXN-10660

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6282, palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate): PWY-6282
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

"3-hydroxyacyl-[acyl-carrier-protein] dehydratase" cannot be used as a page name in this wiki.




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