Difference between revisions of "Tiso gene 569"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTATHIONINE-BETA-SYNTHASE-RXN CYSTATHIONINE-BETA-SYNTHASE-RXN] == * direction: ** REVERSIBLE * co...")
(Created page with "Category:Gene == Gene Tiso_gene_569 == * right end position: ** 15253 * transcription direction: ** POSITIVE * left end position: ** 14232 * centisome position: ** 45.2268...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTATHIONINE-BETA-SYNTHASE-RXN CYSTATHIONINE-BETA-SYNTHASE-RXN] ==
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== Gene Tiso_gene_569 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 15253
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* common name:
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* transcription direction:
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** cysteine
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/4.2.1.22 EC-4.2.1.22]
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** 14232
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* centisome position:
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** 45.226894   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[SER]][c] '''+''' 1 [[HOMO-CYS]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[L-CYSTATHIONINE]][c]
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* With common name(s):
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** 1 L-serine[c] '''+''' 1 L-homocysteine[c] '''<=>''' 1 H2O[c] '''+''' 1 L-cystathionine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_7852]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_3732]]
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** Source: [[orthology-creinhardtii]]
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== Pathways  ==
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* [[HOMOCYSDEGR-PWY]], L-cysteine biosynthesis III (from L-homocysteine): [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSDEGR-PWY HOMOCYSDEGR-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-I9 PWY-I9]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-801]], L-homocysteine and L-cysteine interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-801 PWY-801]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=15253}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10112 10112]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=14232}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01290 R01290]
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{{#set: centisome position=45.226894    }}
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* UNIPROT:
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{{#set: reaction associated=ATPASE-RXN}}
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** [http://www.uniprot.org/uniprot/P32232 P32232]
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** [http://www.uniprot.org/uniprot/P32582 P32582]
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** [http://www.uniprot.org/uniprot/P35520 P35520]
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** [http://www.uniprot.org/uniprot/Q9YCN5 Q9YCN5]
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** [http://www.uniprot.org/uniprot/Q12633 Q12633]
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** [http://www.uniprot.org/uniprot/P72662 P72662]
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** [http://www.uniprot.org/uniprot/O59701 O59701]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=cysteine}}
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{{#set: ec number=EC-4.2.1.22}}
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{{#set: gene associated=Tiso_gene_7852|Tiso_gene_3732}}
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{{#set: in pathway=HOMOCYSDEGR-PWY|PWY-I9|PWY-801}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:19, 21 March 2018

Gene Tiso_gene_569

  • right end position:
    • 15253
  • transcription direction:
    • POSITIVE
  • left end position:
    • 14232
  • centisome position:
    • 45.226894
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_569&oldid=40923"