Difference between revisions of "3.1.4.17-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_16360 == * right end position: ** 3144 * transcription direction: ** NEGATIVE * left end position: ** 449 * centisome position: ** 5.919578...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.17-RXN 3.1.4.17-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** iesterase_family_memb...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_16360 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.17-RXN 3.1.4.17-RXN] ==
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* right end position:
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* direction:
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** 3144
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** iesterase_family_member
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* left end position:
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** amino_acid_transporter
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** 449
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/3.1.4.17 EC-3.1.4.17]
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** 5.919578   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[ARGININE--TRNA-LIGASE-RXN]]
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* With identifiers:
 +
** 1 [[WATER]][c] '''+''' 1 [[Cyclic-3-5-Nucleoside-Monophosphates]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Nucleoside-Monophosphates]][c]
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* With common name(s):
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** 1 H2O[c] '''+''' 1 a nucleoside cyclic 3',5'-monophosphate[c] '''=>''' 1 H+[c] '''+''' 1 a nucleoside 5'-monophosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_9644]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* Gene: [[Tiso_gene_1763]]
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* [[TRNA-CHARGING-PWY]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_12792]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: right end position=3144}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14653 14653]
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{{#set: left end position=449}}
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* LIGAND-RXN:
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{{#set: centisome position=5.919578    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03259 R03259]
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{{#set: reaction associated=ARGININE--TRNA-LIGASE-RXN}}
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* UNIPROT:
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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** [http://www.uniprot.org/uniprot/P12019 P12019]
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** [http://www.uniprot.org/uniprot/Q56686 Q56686]
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** [http://www.uniprot.org/uniprot/P14099 P14099]
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** [http://www.uniprot.org/uniprot/Q01066 Q01066]
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** [http://www.uniprot.org/uniprot/Q01061 Q01061]
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** [http://www.uniprot.org/uniprot/P14100 P14100]
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** [http://www.uniprot.org/uniprot/Q01065 Q01065]
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** [http://www.uniprot.org/uniprot/P27815 P27815]
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** [http://www.uniprot.org/uniprot/O66909 O66909]
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** [http://www.uniprot.org/uniprot/P14270 P14270]
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** [http://www.uniprot.org/uniprot/O27755 O27755]
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** [http://www.uniprot.org/uniprot/P44685 P44685]
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** [http://www.uniprot.org/uniprot/P22434 P22434]
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** [http://www.uniprot.org/uniprot/P0AEW4 P0AEW4]
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** [http://www.uniprot.org/uniprot/O26280 O26280]
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** [http://www.uniprot.org/uniprot/O06629 O06629]
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** [http://www.uniprot.org/uniprot/O30241 O30241]
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** [http://www.uniprot.org/uniprot/P14644 P14644]
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** [http://www.uniprot.org/uniprot/P54748 P54748]
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** [http://www.uniprot.org/uniprot/Q13945 Q13945]
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** [http://www.uniprot.org/uniprot/Q01062 Q01062]
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** [http://www.uniprot.org/uniprot/P54827 P54827]
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** [http://www.uniprot.org/uniprot/Q01064 Q01064]
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** [http://www.uniprot.org/uniprot/Q9NP56 Q9NP56]
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** [http://www.uniprot.org/uniprot/O60658 O60658]
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** [http://www.uniprot.org/uniprot/P36599 P36599]
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** [http://www.uniprot.org/uniprot/P30645 P30645]
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** [http://www.uniprot.org/uniprot/Q45859 Q45859]
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** [http://www.uniprot.org/uniprot/P12252 P12252]
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** [http://www.uniprot.org/uniprot/P06776 P06776]
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** [http://www.uniprot.org/uniprot/Q08493 Q08493]
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** [http://www.uniprot.org/uniprot/Q63421 Q63421]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=iesterase_family_member}}
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{{#set: common name=amino_acid_transporter}}
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{{#set: ec number=EC-3.1.4.17}}
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{{#set: gene associated=Tiso_gene_9644|Tiso_gene_1763|Tiso_gene_12792}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:20, 21 March 2018

Reaction 3.1.4.17-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • iesterase_family_member
    • amino_acid_transporter
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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