Difference between revisions of "PWY-6305"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-508 RXN1G-508] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-lignoceroyl-[acyl-car...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-508 RXN1G-508] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
** 3-oxo-lignoceroyl-[acyl-carrier protein] reductase
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** putrescine biosynthesis IV
** 3-oxoacyl-(acyl-carrier-protein)
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
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* Synonym(s):
 
* Synonym(s):
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** putrescine biosynthesis in plants
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** ODC and ADC putrescine biosynthesis
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''3''' reactions found over '''4''' reactions in the full pathway
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[3-oxo-lignoceroyl-ACPs]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-hydroxylignoceroyl-ACPs]][c]
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* [[AGMATIN-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 a 3-oxo-lignoceroyl-[acp][c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R)-3-hydroxylignoceroyl-[acp][c]
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*** [[Tiso_gene_4415]]
 
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** 1 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[orthology-esiliculosus]]
Genes have been associated with this reaction based on different elements listed below.
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* [[ARGINASE-RXN]]
* [[Tiso_gene_9885]]
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** 1 associated gene(s):
** EXPERIMENTAL_ANNOTATION
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*** [[Tiso_gene_4415]]
***EC-NUMBER
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** 4 reconstruction source(s) associated:
* [[Tiso_gene_13083]]
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*** [[annotation-in-silico_annotation]]
** IN-SILICO_ANNOTATION
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*** [[orthology-athaliana]]
***EC-NUMBER
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*** [[annotation-experimental_annotation]]
** EXPERIMENTAL_ANNOTATION
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*** [[orthology-esiliculosus]]
***EC-NUMBER
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* [[ORNDECARBOX-RXN]]
** [[pantograph]]-[[esiliculosus]]
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** 1 associated gene(s):
== Pathways  ==
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*** [[Tiso_gene_10737]]
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
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** 1 reconstruction source(s) associated:
** '''86''' reactions found over '''182''' reactions in the full pathway
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*** [[orthology-esiliculosus]]
== Reconstruction information  ==
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== Reaction(s) not found ==
* Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=ARGDECARBOX-RXN ARGDECARBOX-RXN]
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-33090}}
{{#set: common name=3-oxo-lignoceroyl-[acyl-carrier protein] reductase}}
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{{#set: common name=putrescine biosynthesis IV}}
{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
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{{#set: common name=putrescine biosynthesis in plants|ODC and ADC putrescine biosynthesis}}
{{#set: ec number=EC-1.1.1.100}}
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{{#set: reaction found=3}}
{{#set: gene associated=Tiso_gene_9885|Tiso_gene_13083}}
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{{#set: total reaction=4}}
{{#set: in pathway=PWYG-321}}
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{{#set: completion rate=75.0}}
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:20, 21 March 2018

Pathway PWY-6305

  • taxonomic range:
  • common name:
    • putrescine biosynthesis IV
  • Synonym(s):
    • putrescine biosynthesis in plants
    • ODC and ADC putrescine biosynthesis

Reaction(s) found

3 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links