Difference between revisions of "RXN1F-168"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UDP UDP] == * smiles: ** C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N2(C=CC(=O)NC(=O)2)) *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-168 RXN1F-168] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UDP UDP] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-168 RXN1F-168] ==
−
* smiles:
+
* direction:
−
** C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N2(C=CC(=O)NC(=O)2))
+
** LEFT-TO-RIGHT
−
* inchi key:
+
* ec number:
−
** InChIKey=XCCTYIAWTASOJW-XVFCMESISA-K
+
** [http://enzyme.expasy.org/EC/1.14.11.12 EC-1.14.11.12]
−
* common name:
+
−
** UDP
+
−
* molecular weight:
+
−
** 401.14  
+
 
* Synonym(s):
 
* Synonym(s):
−
** uridine-diphosphate
 
−
** uridine-5'-diphosphate
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[UDPKIN-RXN]]
+
* With identifiers:
−
* [[UMPU]]
+
** 1 [[CPD-10332]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD1F-96]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[WATER]][c]
−
* [[UPH]]
+
* With common name(s):
−
* [[RXN0-722]]
+
** 1 gibberellin44 (open lactone form)[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''=>''' 1 CO2[c] '''+''' 1 gibberellin A19[c] '''+''' 1 succinate[c] '''+''' 1 H2O[c]
−
* [[UDPREDUCT-RXN]]
+
 
−
* [[ATUD]]
+
== Genes associated with this reaction  ==
−
* [[RXN-12197]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[ATUDm]]
+
* Gene: [[Tiso_gene_3330]]
−
== Reaction(s) known to produce the compound ==
+
** Source: [[orthology-athaliana]]
−
* [[UG6PGT]]
+
== Pathways  ==
−
* [[2.4.1.145-RXN]]
+
* [[PWY-5035]], gibberellin biosynthesis III (early C-13 hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5035 PWY-5035]
−
* [[2.4.1.223-RXN]]
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[RXN-18302]]
+
== Reconstruction information  ==
−
* [[2.4.1.151-RXN]]
+
* Category: [[orthology]]
−
* [[RXN-14361]]
+
** Source: [[orthology-athaliana]]
−
* [[RXN-12196]]
+
*** Tool: [[pantograph]]
−
* [[2.4.1.224-RXN]]
+
−
* [[UTCY]]
+
−
* [[2.4.1.141-RXN]]
+
−
* [[TREHALOSE6PSYN-RXN]]
+
−
* [[RXN-10618]]
+
−
* [[RXN-10619]]
+
−
* [[RXN-10616]]
+
−
* [[RXN-10617]]
+
−
* [[SUCROSE-PHOSPHATE-SYNTHASE-RXN]]
+
−
* [[RXN-11060]]
+
−
* [[RXN-16648]]
+
−
* [[UDP-GLUCURONOSYLTRANSFERASE-RXN]]
+
−
* [[RXN-15117]]
+
−
* [[UG6PGTn]]
+
−
* [[CELLULOSE-SYNTHASE-UDP-FORMING-RXN]]
+
−
* [[RXN66-83]]
+
−
* [[RXN-1224]]
+
−
* [[RXN-1225]]
+
−
* [[RXN-7828]]
+
−
* [[2.4.1.123-RXN]]
+
−
* [[LACTOSE-SYNTHASE-RXN]]
+
−
* [[2.4.1.117-RXN]]
+
−
* [[RXN-13608]]
+
−
* [[RXN-8228]]
+
−
* [[2.4.1.46-RXN]]
+
−
* [[RXN-10609]]
+
−
* [[RXN-10608]]
+
−
* [[UTUP]]
+
−
* [[13-BETA-GLUCAN-SYNTHASE-RXN]]
+
−
* [[RXN-10606]]
+
−
* [[RXN-9000]]
+
−
* [[RXN-13607]]
+
−
* [[UMPKf]]
+
−
* [[2.4.1.135-RXN]]
+
−
* [[RXN66-168]]
+
−
* [[RXN-12002]]
+
−
* [[RXN-10784]]
+
−
* [[2.4.1.225-RXN]]
+
−
* [[UTPH]]
+
−
* [[RXN-10607]]
+
−
* [[LIPIDADISACCHARIDESYNTH-RXN]]
+
−
* [[RXN66-162]]
+
−
== Reaction(s) of unknown directionality ==
+
−
* [[RXN-16027]]
+
−
* [[RXN-7873]]
+
−
* [[2.4.1.198-RXN]]
+
−
* [[2.4.1.229-RXN]]
+
 
== External links  ==
 
== External links  ==
−
* CAS : 58-98-0
+
* RHEA:
−
* METABOLIGHTS : MTBLC58223
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16033 16033]
−
* PUBCHEM:
+
* LIGAND-RXN:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=20056717 20056717]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07184 R07184]
−
* KNAPSACK : C00007313
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* HMDB : HMDB00295
+
{{#set: ec number=EC-1.14.11.12}}
−
* LIGAND-CPD:
+
{{#set: gene associated=Tiso_gene_3330}}
−
** [http://www.genome.jp/dbget-bin/www_bget?C00015 C00015]
+
{{#set: in pathway=PWY-5035}}
−
* CHEMSPIDER:
+
{{#set: reconstruction category=orthology}}
−
** [http://www.chemspider.com/Chemical-Structure.16739715.html 16739715]
+
{{#set: reconstruction source=orthology-athaliana}}
−
* CHEBI:
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58223 58223]
+
−
* BIGG : udp
+
−
{{#set: smiles=C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N2(C=CC(=O)NC(=O)2))}}
+
−
{{#set: inchi key=InChIKey=XCCTYIAWTASOJW-XVFCMESISA-K}}
+
−
{{#set: common name=UDP}}
+
−
{{#set: molecular weight=401.14    }}
+
−
{{#set: common name=uridine-diphosphate|uridine-5'-diphosphate}}
+
−
{{#set: consumed by=UDPKIN-RXN|UMPU|UPH|RXN0-722|UDPREDUCT-RXN|ATUD|RXN-12197|ATUDm}}
+
−
{{#set: produced by=UG6PGT|2.4.1.145-RXN|2.4.1.223-RXN|RXN-18302|2.4.1.151-RXN|RXN-14361|RXN-12196|2.4.1.224-RXN|UTCY|2.4.1.141-RXN|TREHALOSE6PSYN-RXN|RXN-10618|RXN-10619|RXN-10616|RXN-10617|SUCROSE-PHOSPHATE-SYNTHASE-RXN|RXN-11060|RXN-16648|UDP-GLUCURONOSYLTRANSFERASE-RXN|RXN-15117|UG6PGTn|CELLULOSE-SYNTHASE-UDP-FORMING-RXN|RXN66-83|RXN-1224|RXN-1225|RXN-7828|2.4.1.123-RXN|LACTOSE-SYNTHASE-RXN|2.4.1.117-RXN|RXN-13608|RXN-8228|2.4.1.46-RXN|RXN-10609|RXN-10608|UTUP|13-BETA-GLUCAN-SYNTHASE-RXN|RXN-10606|RXN-9000|RXN-13607|UMPKf|2.4.1.135-RXN|RXN66-168|RXN-12002|RXN-10784|2.4.1.225-RXN|UTPH|RXN-10607|LIPIDADISACCHARIDESYNTH-RXN|RXN66-162}}
+
−
{{#set: reversible reaction associated=RXN-16027|RXN-7873|2.4.1.198-RXN|2.4.1.229-RXN}}
+

Latest revision as of 19:20, 21 March 2018

Reaction RXN1F-168

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5035, gibberellin biosynthesis III (early C-13 hydroxylation): PWY-5035
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN1F-168&oldid=41028"