Difference between revisions of "PWY-699"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9634 RXN-9634] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase * ec numb...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-699 PWY-699] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9634 RXN-9634] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-699 PWY-699] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
 
* common name:
 
* common name:
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** polyketide_synthase
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** brassinosteroid biosynthesis I
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''11''' reactions found over '''25''' reactions in the full pathway
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** 1 [[R-3-hydroxystearoyl-ACPs]][c] '''=>''' 1 [[Octadec-2-enoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
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* [[RXN-11535]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 a (3R)-3-hydroxystearoyl-[acp][c] '''=>''' 1 a trans-octadec-2-enoyl-[acp][c] '''+''' 1 H2O[c]
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*** [[Tiso_gene_8263]]
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*** [[Tiso_gene_3577]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_135]]
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* [[RXN-4241]]
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** IN-SILICO_ANNOTATION
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** 2 associated gene(s):
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***EC-NUMBER
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*** [[Tiso_gene_8263]]
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* [[Tiso_gene_6884]]
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*** [[Tiso_gene_3577]]
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** EXPERIMENTAL_ANNOTATION
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** 1 reconstruction source(s) associated:
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***AUTOMATED-NAME-MATCH
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_10876]]
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* [[RXN-711]]
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** IN-SILICO_ANNOTATION
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** 1 associated gene(s):
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***EC-NUMBER
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*** [[Tiso_gene_14327]]
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* [[Tiso_gene_136]]
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** 1 reconstruction source(s) associated:
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** IN-SILICO_ANNOTATION
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*** [[orthology-athaliana]]
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***EC-NUMBER
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* [[RXN-715]]
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* [[Tiso_gene_500]]
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** 2 associated gene(s):
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_8263]]
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***EC-NUMBER
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*** [[Tiso_gene_3577]]
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* [[Tiso_gene_13394]]
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** 1 reconstruction source(s) associated:
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** IN-SILICO_ANNOTATION
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*** [[orthology-esiliculosus]]
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***EC-NUMBER
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* [[RXN-716]]
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== Pathways  ==
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** 2 associated gene(s):
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* [[PWY-5989]], stearate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5989 PWY-5989]
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*** [[Tiso_gene_8263]]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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*** [[Tiso_gene_3577]]
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* [[PWY3O-355]], stearate biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355]
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** 1 reconstruction source(s) associated:
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** '''6''' reactions found over '''6''' reactions in the full pathway
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*** [[orthology-esiliculosus]]
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== Reconstruction information  ==
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* [[RXN-717]]
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* [[manual]]:
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** 2 associated gene(s):
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** [[primary_network]]
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*** [[Tiso_gene_8263]]
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* [[annotation]]:
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*** [[Tiso_gene_3577]]
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** [[pathwaytools]]:
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** 1 reconstruction source(s) associated:
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*** [[experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[in-silico_annotation]]
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* [[RXN-773]]
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** 2 associated gene(s):
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*** [[Tiso_gene_3577]]
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*** [[Tiso_gene_8263]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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* [[RXN-774]]
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** 2 associated gene(s):
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*** [[Tiso_gene_8263]]
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*** [[Tiso_gene_3577]]
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** 1 reconstruction source(s) associated:
 +
*** [[orthology-esiliculosus]]
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* [[RXN-775]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_3577]]
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*** [[Tiso_gene_8263]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-esiliculosus]]
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* [[RXN-778]]
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** 2 associated gene(s):
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*** [[Tiso_gene_3577]]
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*** [[Tiso_gene_8263]]
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** 1 reconstruction source(s) associated:
 +
*** [[orthology-esiliculosus]]
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* [[RXN-779]]
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** 2 associated gene(s):
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*** [[Tiso_gene_3577]]
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*** [[Tiso_gene_8263]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11536 RXN-11536]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16171 RXN-16171]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16172 RXN-16172]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16173 RXN-16173]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-709 RXN-709]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-710 RXN-710]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-712 RXN-712]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-713 RXN-713]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-714 RXN-714]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-718 RXN-718]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-719 RXN-719]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-720 RXN-720]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-776 RXN-776]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-777 RXN-777]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* ARACYC:
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{{#set: common name=polyketide_synthase}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-699 PWY-699]
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: taxonomic range=TAX-3193}}
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{{#set: ec number=EC-4.2.1.59}}
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{{#set: common name=brassinosteroid biosynthesis I}}
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{{#set: gene associated=Tiso_gene_135|Tiso_gene_6884|Tiso_gene_10876|Tiso_gene_136|Tiso_gene_500|Tiso_gene_13394}}
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{{#set: reaction found=11}}
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{{#set: in pathway=PWY-5989|PWY3O-355}}
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{{#set: total reaction=25}}
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{{#set: reconstruction category=manual}}
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{{#set: completion rate=44.0}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:20, 21 March 2018

Pathway PWY-699

  • taxonomic range:
  • common name:
    • brassinosteroid biosynthesis I
  • Synonym(s):

Reaction(s) found

11 reactions found over 25 reactions in the full pathway

Reaction(s) not found

External links



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-699&oldid=41030"