Difference between revisions of "PWY-7176"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1143 RXN-1143] == * direction: ** LEFT-TO-RIGHT * common name: ** caffeate_o-methyltransferase...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7176 PWY-7176] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1143 RXN-1143] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7176 PWY-7176] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** caffeate_o-methyltransferase
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** UTP and CTP de novo biosynthesis
* ec number:
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** [http://enzyme.expasy.org/EC/2.1.1.68 EC-2.1.1.68]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''3''' reactions found over '''3''' reactions in the full pathway
** 1 [[5-HYDROXY-CONIFERALDEHYDE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[SINAPALDEHYDE]][c]
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* [[CTPSYN-RXN]]
* With common name(s):
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** 0 associated gene:
** 1 5-hydroxy-coniferaldehyde[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 sinapaldehyde[c]
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** 3 reconstruction source(s) associated:
 
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*** [[annotation-experimental_annotation]]
== Genes associated with this reaction  ==
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*** [[manual-primary_network]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-in-silico_annotation]]
* Gene: [[Tiso_gene_18257]]
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* [[RXN-12002]]
** Source: [[orthology-esiliculosus]]
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** 5 associated gene(s):
* Gene: [[Tiso_gene_18971]]
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*** [[Tiso_gene_17057]]
** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_14116]]
*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_2386]]
== Pathways  ==
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*** [[Tiso_gene_9739]]
* [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361]
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*** [[Tiso_gene_19734]]
** '''7''' reactions found over '''15''' reactions in the full pathway
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** 6 reconstruction source(s) associated:
* [[PWY-5168]], ferulate and sinapate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5168 PWY-5168]
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*** [[annotation-experimental_annotation]]
** '''2''' reactions found over '''4''' reactions in the full pathway
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*** [[orthology-esiliculosus]]
== Reconstruction information  ==
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*** [[annotation-in-silico_annotation]]
* Category: [[orthology]]
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*** [[orthology-athaliana]]
** Source: [[orthology-esiliculosus]]
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*** [[manual-primary_network]]
*** Tool: [[pantograph]]
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*** [[orthology-creinhardtii]]
* Category: [[annotation]]
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* [[UDPKIN-RXN]]
** Source: [[annotation-in-silico_annotation]]
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** 6 associated gene(s):
*** Tool: [[pathwaytools]]
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*** [[Tiso_gene_16529]]
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*** [[Tiso_gene_18224]]
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*** [[Tiso_gene_17272]]
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*** [[Tiso_gene_9290]]
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*** [[Tiso_gene_195]]
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*** [[Tiso_gene_17271]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
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* ECOCYC:
** [http://www.genome.jp/dbget-bin/www_bget?R06576 R06576]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-7176 PWY-7176]
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2157}}
{{#set: common name=caffeate_o-methyltransferase}}
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{{#set: taxonomic range=TAX-2759}}
{{#set: ec number=EC-2.1.1.68}}
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{{#set: taxonomic range=TAX-2}}
{{#set: gene associated=Tiso_gene_18257|Tiso_gene_18971}}
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{{#set: common name=UTP and CTP de novo biosynthesis}}
{{#set: in pathway=PWY-361|PWY-5168}}
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{{#set: reaction found=3}}
{{#set: reconstruction category=orthology|annotation}}
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{{#set: total reaction=3}}
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: completion rate=100.0}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:21, 21 March 2018

Pathway PWY-7176

Reaction(s) found

3 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links