Difference between revisions of "Tiso gene 6180"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN 35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN] == * direction: ** LEFT-TO...")
(Created page with "Category:Gene == Gene Tiso_gene_6180 == * right end position: ** 11601 * transcription direction: ** POSITIVE * left end position: ** 56 * centisome position: ** 0.4491498...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN 35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN] ==
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== Gene Tiso_gene_6180 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 11601
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.1.4.35 EC-3.1.4.35]
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** POSITIVE
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* left end position:
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** 56
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* centisome position:
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** 0.44914982   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CGMP]][c] '''=>''' 1 [[GMP]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 cyclic-GMP[c] '''=>''' 1 GMP[c] '''+''' 1 H+[c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* [[Tiso_gene_12792]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[creinhardtii]]
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*** Assignment: ec-number
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** [[pantograph]]-[[creinhardtii]]
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* Reaction: [[RXN-12196]]
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* [[Tiso_gene_13785]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[creinhardtii]]
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*** Assignment: ec-number
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** [[pantograph]]-[[creinhardtii]]
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* Reaction: [[RXN0-5462]]
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* [[Tiso_gene_9644]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[creinhardtii]]
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*** Assignment: ec-number
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** [[pantograph]]-[[creinhardtii]]
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== Pathways associated ==
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== Pathways ==
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* [[PWY-7184]]
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== Reconstruction information  ==
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* [[PWY-7198]]
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* [[orthology]]:
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* [[PWY-6545]]
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** [[pantograph]]:
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* [[PWY-7210]]
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*** [[creinhardtii]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=11601}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16957 16957]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=56}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01234 R01234]
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{{#set: centisome position=0.44914982    }}
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* UNIPROT:
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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** [http://www.uniprot.org/uniprot/P04972 P04972]
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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** [http://www.uniprot.org/uniprot/P16586 P16586]
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** [http://www.uniprot.org/uniprot/P23439 P23439]
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** [http://www.uniprot.org/uniprot/P35913 P35913]
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** [http://www.uniprot.org/uniprot/P33726 P33726]
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** [http://www.uniprot.org/uniprot/P09174 P09174]
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** [http://www.uniprot.org/uniprot/P52731 P52731]
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** [http://www.uniprot.org/uniprot/P51160 P51160]
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** [http://www.uniprot.org/uniprot/P18545 P18545]
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** [http://www.uniprot.org/uniprot/O76074 O76074]
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** [http://www.uniprot.org/uniprot/P11541 P11541]
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** [http://www.uniprot.org/uniprot/P27664 P27664]
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** [http://www.uniprot.org/uniprot/Q62037 Q62037]
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** [http://www.uniprot.org/uniprot/P23440 P23440]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-3.1.4.35}}
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{{#set: gene associated=Tiso_gene_12792|Tiso_gene_13785|Tiso_gene_9644}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii}}
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Latest revision as of 20:21, 21 March 2018

Gene Tiso_gene_6180

  • right end position:
    • 11601
  • transcription direction:
    • POSITIVE
  • left end position:
    • 56
  • centisome position:
    • 0.44914982
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6180&oldid=41123"