Difference between revisions of "RXN-15829"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_19691 == * left end position: ** 353 * transcription direction: ** POSITIVE * right end position: ** 1995 * centisome position: ** 16.77756...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15829 RXN-15829] == * direction: ** LEFT-TO-RIGHT * common name: ** probable_mitochondrial-proc...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15829 RXN-15829] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | * | + | * common name: |
| − | ** | + | ** probable_mitochondrial-processingpeptidasesubunitbeta |
| − | * | + | ** cytochrome_b6-fcomplexiron-sulfurchloroplastic |
| − | ** | + | ** ubiquinol-cytochrome_c_reductase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/1.10.2.2 EC-1.10.2.2] |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** in-silico_annotation | + | ** 1 [[Ubiquinones]][c] '''+''' 2 [[Reduced-CycA1-cytochromes]][e] '''+''' 4 [[PROTON]][c] '''=>''' 1 [[Ubiquinols]][c] '''+''' 2 [[PROTON]][e] '''+''' 2 [[Oxidized-CycA1-cytochromes]][e] |
| − | *** | + | * With common name(s): |
| − | ** experimental_annotation | + | ** 1 a ubiquinone[c] '''+''' 2 a reduced CycA1 cytochrome[e] '''+''' 4 H+[c] '''=>''' 1 an ubiquinol[c] '''+''' 2 H+[e] '''+''' 2 an oxidized CycA1 cytochrome[e] |
| − | *** | + | |
| − | ** [[ | + | == Genes associated with this reaction == |
| − | == Pathways | + | Genes have been associated with this reaction based on different elements listed below. |
| − | * [[PWY-6692]] | + | * Gene: [[Tiso_gene_7235]] |
| − | * [[ | + | ** Source: [[orthology-esiliculosus]] |
| − | * [[ | + | * Gene: [[Tiso_gene_9627]] |
| − | * [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | * [[ | + | *** Assignment: EC-NUMBER |
| − | * [[ | + | ** Source: [[annotation-experimental_annotation]] |
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_4973]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | * Gene: [[Tiso_gene_18330]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[Tiso_gene_15926]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | == Pathways == | ||
| + | * [[PWY-6692]], Fe(II) oxidation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6692 PWY-6692] | ||
| + | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=probable_mitochondrial-processingpeptidasesubunitbeta}} |
| − | {{#set: | + | {{#set: common name=cytochrome_b6-fcomplexiron-sulfurchloroplastic}} |
| − | {{#set: | + | {{#set: common name=ubiquinol-cytochrome_c_reductase}} |
| − | {{#set: | + | {{#set: ec number=EC-1.10.2.2}} |
| − | {{#set: pathway | + | {{#set: gene associated=Tiso_gene_7235|Tiso_gene_9627|Tiso_gene_4973|Tiso_gene_18330|Tiso_gene_15926}} |
| + | {{#set: in pathway=PWY-6692}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 20:21, 21 March 2018
Contents
Reaction RXN-15829
- direction:
- LEFT-TO-RIGHT
- common name:
- probable_mitochondrial-processingpeptidasesubunitbeta
- cytochrome_b6-fcomplexiron-sulfurchloroplastic
- ubiquinol-cytochrome_c_reductase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 Ubiquinones[c] + 2 Reduced-CycA1-cytochromes[e] + 4 PROTON[c] => 1 Ubiquinols[c] + 2 PROTON[e] + 2 Oxidized-CycA1-cytochromes[e]
- With common name(s):
- 1 a ubiquinone[c] + 2 a reduced CycA1 cytochrome[e] + 4 H+[c] => 1 an ubiquinol[c] + 2 H+[e] + 2 an oxidized CycA1 cytochrome[e]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_7235
- Source: orthology-esiliculosus
- Gene: Tiso_gene_9627
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_4973
- Source: orthology-esiliculosus
- Gene: Tiso_gene_18330
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_15926
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
