Difference between revisions of "3.4.16.5-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.16.5-RXN 3.4.16.5-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Carboxypeptidase Y ho...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.16.5-RXN 3.4.16.5-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** sucrose biosynthesis II
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** Carboxypeptidase Y homolog A
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* ec number:
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** [http://enzyme.expasy.org/EC/3.4.16.5 EC-3.4.16.5]
 
* Synonym(s):
 
* Synonym(s):
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** sucrose biosynthesis II (from starch degradation intermediates)
 
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** sucrose biosynthesis II (plant cytosol)
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''6''' reactions found over '''8''' reactions in the full pathway
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* With identifiers:
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* [[GLUC1PURIDYLTRANS-RXN]]
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** 1 [[Peptides-holder]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Amino-Acids-20]][c] '''+''' 1 [[Peptides-holder]][c]
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** 14 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_6459]]
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** 1 a peptide[c] '''+''' 1 H2O[c] '''=>''' 1 a proteinogenic amino acid[c] '''+''' 1 a peptide[c]
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*** [[Tiso_gene_5879]]
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*** [[Tiso_gene_17566]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_16930]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_14796]]
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* Gene: [[Tiso_gene_514]]
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*** [[Tiso_gene_9110]]
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_17531]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_4816]]
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== Pathways  ==
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*** [[Tiso_gene_7102]]
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== Reconstruction information  ==
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*** [[Tiso_gene_13477]]
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* Category: [[annotation]]
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*** [[Tiso_gene_7440]]
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_11401]]
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*** Tool: [[pathwaytools]]
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*** [[Tiso_gene_6457]]
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*** [[Tiso_gene_6458]]
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** 4 reconstruction source(s) associated:
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−
*** [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[GLUCOKIN-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_3107]]
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*** [[Tiso_gene_1303]]
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** 4 reconstruction source(s) associated:
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−
*** [[annotation-experimental_annotation]]
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−
*** [[annotation-in-silico_annotation]]
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−
*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[PGLUCISOM-RXN]]
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−
** 1 associated gene(s):
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−
*** [[Tiso_gene_19480]]
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−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
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−
*** [[annotation-in-silico_annotation]]
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−
*** [[orthology-esiliculosus]]
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* [[PHOSPHOGLUCMUT-RXN]]
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** 2 associated gene(s):
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−
*** [[Tiso_gene_13477]]
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−
*** [[Tiso_gene_4816]]
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−
** 3 reconstruction source(s) associated:
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−
*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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−
*** [[annotation-experimental_annotation]]
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* [[RXN-14353]]
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** 1 associated gene(s):
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*** [[Tiso_gene_1011]]
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−
** 1 reconstruction source(s) associated:
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−
*** [[annotation-in-silico_annotation]]
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−
* [[SUCROSE-PHOSPHATE-SYNTHASE-RXN]]
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** 1 associated gene(s):
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−
*** [[Tiso_gene_14247]]
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−
** 1 reconstruction source(s) associated:
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−
*** [[annotation-in-silico_annotation]]
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−
== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14354 RXN-14354]
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−
* [http://metacyc.org/META/NEW-IMAGE?object=SUCROSE-PHOSPHATASE-RXN SUCROSE-PHOSPHATASE-RXN]
+
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33090}}
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* UNIPROT:
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{{#set: common name=sucrose biosynthesis II}}
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** [http://www.uniprot.org/uniprot/P11515 P11515]
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{{#set: common name=sucrose biosynthesis II (from starch degradation intermediates)|sucrose biosynthesis II (plant cytosol)}}
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** [http://www.uniprot.org/uniprot/P10619 P10619]
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{{#set: reaction found=6}}
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** [http://www.uniprot.org/uniprot/P07519 P07519]
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{{#set: total reaction=8}}
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** [http://www.uniprot.org/uniprot/P00729 P00729]
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{{#set: completion rate=75.0}}
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** [http://www.uniprot.org/uniprot/P37891 P37891]
 +
** [http://www.uniprot.org/uniprot/P37890 P37890]
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** [http://www.uniprot.org/uniprot/P38109 P38109]
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** [http://www.uniprot.org/uniprot/P52710 P52710]
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** [http://www.uniprot.org/uniprot/Q41005 Q41005]
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** [http://www.uniprot.org/uniprot/P52712 P52712]
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** [http://www.uniprot.org/uniprot/Q41689 Q41689]
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** [http://www.uniprot.org/uniprot/Q41691 Q41691]
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** [http://www.uniprot.org/uniprot/O13849 O13849]
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{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Carboxypeptidase Y homolog A}}
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{{#set: ec number=EC-3.4.16.5}}
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{{#set: gene associated=Tiso_gene_514}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:21, 21 March 2018

Reaction 3.4.16.5-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Carboxypeptidase Y homolog A
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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