Difference between revisions of "CSx"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13202 RXN-13202] == * direction: ** LEFT-TO-RIGHT * common name: ** carbamoyl_phosphate_synthet...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CSx CSx] == * direction: ** LEFT-TO-RIGHT * common name: ** citrate synthase, glyoxysomal * Synonym...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13202 RXN-13202] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CSx CSx] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** carbamoyl_phosphate_synthetase
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** citrate synthase, glyoxysomal
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** protein_pyr1-3
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−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/6.3.4.16 EC-6.3.4.16]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[HCO3]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 2 [[ATP]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[CARBAMOYL-P]][c] '''+''' 2 [[ADP]][c] '''+''' 1 [[Pi]][c]
+
** 1.0 [[ACETYL-COA]][x] '''+''' 1.0 [[WATER]][x] '''+''' 1.0 [[OXALACETIC_ACID]][x] '''=>''' 1.0 [[PROTON]][x] '''+''' 1.0 [[CIT]][x] '''+''' 1.0 [[CO-A]][x]
 
* With common name(s):
 
* With common name(s):
−
** 1 hydrogencarbonate[c] '''+''' 1 ammonium[c] '''+''' 2 ATP[c] '''=>''' 2 H+[c] '''+''' 1 carbamoyl phosphate[c] '''+''' 2 ADP[c] '''+''' 1 phosphate[c]
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** 1.0 acetyl-CoA[x] '''+''' 1.0 H2O[x] '''+''' 1.0 oxaloacetate[x] '''=>''' 1.0 H+[x] '''+''' 1.0 citrate[x] '''+''' 1.0 coenzyme A[x]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_4976]]
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* Gene: [[Tiso_gene_9603]]
−
** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-creinhardtii]]
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*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_4685]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_4975]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10624 10624]
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18030 18030]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00149 R00149]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/O15829 O15829]
 
−
** [http://www.uniprot.org/uniprot/O15830 O15830]
 
−
** [http://www.uniprot.org/uniprot/P07756 P07756]
 
−
** [http://www.uniprot.org/uniprot/P31327 P31327]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=carbamoyl_phosphate_synthetase}}
+
{{#set: common name=citrate synthase, glyoxysomal}}
−
{{#set: common name=protein_pyr1-3}}
+
{{#set: gene associated=Tiso_gene_9603}}
−
{{#set: ec number=EC-6.3.4.16}}
+
{{#set: in pathway=}}
−
{{#set: gene associated=Tiso_gene_4976|Tiso_gene_4685|Tiso_gene_4975}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: in pathway=PWY-4984}}
+
{{#set: reconstruction source=orthology-creinhardtii}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:22, 21 March 2018

Reaction CSx

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • citrate synthase, glyoxysomal
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 acetyl-CoA[x] + 1.0 H2O[x] + 1.0 oxaloacetate[x] => 1.0 H+[x] + 1.0 citrate[x] + 1.0 coenzyme A[x]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CSx&oldid=41199"