Difference between revisions of "NITRATE-REDUCTASE-NADH-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6268 PWY-6268] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6268 PWY-6268] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
 
* common name:
 
* common name:
−
** adenosylcobalamin salvage from cobalamin
+
** assimilatory_nitrate_reductase
 +
** ORF
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.7.1.1 EC-1.7.1.1]
 
* Synonym(s):
 
* Synonym(s):
−
** vitamin B12 biosynthesis
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
* '''1''' reaction(s) found
+
* With identifiers:
−
** [[COBALADENOSYLTRANS-RXN]]
+
** 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NITRATE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[NITRITE]][c] '''+''' 1 [[NAD]][c]
−
== Reaction(s) not found ==
+
* With common name(s):
−
* '''0''' reaction(s) not found
+
** 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 nitrate[c] '''=>''' 1 H2O[c] '''+''' 1 nitrite[c] '''+''' 1 NAD+[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_16889]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_18918]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY-381]], nitrate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-381 PWY-381]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* ECOCYC:
+
* RHEA:
−
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6268 PWY-6268]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17913 17913]
−
{{#set: taxonomic range=TAX-2157}}
+
* LIGAND-RXN:
−
{{#set: taxonomic range=TAX-2}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00794 R00794]
−
{{#set: common name=adenosylcobalamin salvage from cobalamin}}
+
* UNIPROT:
−
{{#set: common name=vitamin B12 biosynthesis}}
+
** [http://www.uniprot.org/uniprot/Q39607 Q39607]
−
{{#set: reaction found=1}}
+
** [http://www.uniprot.org/uniprot/Q41201 Q41201]
−
{{#set: reaction not found=0}}
+
** [http://www.uniprot.org/uniprot/P17569 P17569]
 +
** [http://www.uniprot.org/uniprot/P54233 P54233]
 +
** [http://www.uniprot.org/uniprot/P36841 P36841]
 +
** [http://www.uniprot.org/uniprot/P27967 P27967]
 +
** [http://www.uniprot.org/uniprot/P27969 P27969]
 +
** [http://www.uniprot.org/uniprot/P11035 P11035]
 +
** [http://www.uniprot.org/uniprot/P08509 P08509]
 +
** [http://www.uniprot.org/uniprot/P11605 P11605]
 +
** [http://www.uniprot.org/uniprot/P23312 P23312]
 +
** [http://www.uniprot.org/uniprot/P17570 P17570]
 +
** [http://www.uniprot.org/uniprot/P16081 P16081]
 +
** [http://www.uniprot.org/uniprot/Q01170 Q01170]
 +
** [http://www.uniprot.org/uniprot/P39865 P39865]
 +
** [http://www.uniprot.org/uniprot/P11832 P11832]
 +
** [http://www.uniprot.org/uniprot/P39869 P39869]
 +
** [http://www.uniprot.org/uniprot/Q43265 Q43265]
 +
** [http://www.uniprot.org/uniprot/P43101 P43101]
 +
** [http://www.uniprot.org/uniprot/P43100 P43100]
 +
** [http://www.uniprot.org/uniprot/Q42497 Q42497]
 +
** [http://www.uniprot.org/uniprot/P39866 P39866]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=assimilatory_nitrate_reductase}}
 +
{{#set: common name=ORF}}
 +
{{#set: ec number=EC-1.7.1.1}}
 +
{{#set: gene associated=Tiso_gene_16889|Tiso_gene_18918}}
 +
{{#set: in pathway=PWY-381}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=orthology-creinhardtii|annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:23, 21 March 2018

Reaction NITRATE-REDUCTASE-NADH-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • assimilatory_nitrate_reductase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADH[c] + 1 H+[c] + 1 nitrate[c] => 1 H2O[c] + 1 nitrite[c] + 1 NAD+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-381, nitrate reduction II (assimilatory): PWY-381
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=NITRATE-REDUCTASE-NADH-RXN&oldid=41244"