Difference between revisions of "NITRATE-REDUCTASE-NADH-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_2815 == * right end position: ** 5977 * transcription direction: ** NEGATIVE * left end position: ** 4841 * centisome position: ** 26.33411...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_2815 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] ==
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* right end position:
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* direction:
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** 5977
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** assimilatory_nitrate_reductase
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* left end position:
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** ORF
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** 4841
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.7.1.1 EC-1.7.1.1]
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** 26.334112   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[RXN-15556]]
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* With identifiers:
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** 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NITRATE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[NITRITE]][c] '''+''' 1 [[NAD]][c]
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* With common name(s):
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** 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 nitrate[c] '''=>''' 1 H2O[c] '''+''' 1 nitrite[c] '''+''' 1 NAD+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_16889]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_18918]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** Assignment: EC-NUMBER
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* Reaction: [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-381]], nitrate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-381 PWY-381]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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* [[PWY-7511]]
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== External links  ==
 
== External links  ==
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{{#set: right end position=5977}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17913 17913]
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{{#set: left end position=4841}}
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* LIGAND-RXN:
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{{#set: centisome position=26.334112    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00794 R00794]
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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* UNIPROT:
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{{#set: pathway associated=PWY-7511}}
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** [http://www.uniprot.org/uniprot/Q39607 Q39607]
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** [http://www.uniprot.org/uniprot/Q41201 Q41201]
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** [http://www.uniprot.org/uniprot/P17569 P17569]
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** [http://www.uniprot.org/uniprot/P54233 P54233]
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** [http://www.uniprot.org/uniprot/P36841 P36841]
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** [http://www.uniprot.org/uniprot/P27967 P27967]
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** [http://www.uniprot.org/uniprot/P27969 P27969]
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** [http://www.uniprot.org/uniprot/P11035 P11035]
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** [http://www.uniprot.org/uniprot/P08509 P08509]
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** [http://www.uniprot.org/uniprot/P11605 P11605]
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** [http://www.uniprot.org/uniprot/P23312 P23312]
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** [http://www.uniprot.org/uniprot/P17570 P17570]
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** [http://www.uniprot.org/uniprot/P16081 P16081]
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** [http://www.uniprot.org/uniprot/Q01170 Q01170]
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** [http://www.uniprot.org/uniprot/P39865 P39865]
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** [http://www.uniprot.org/uniprot/P11832 P11832]
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** [http://www.uniprot.org/uniprot/P39869 P39869]
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** [http://www.uniprot.org/uniprot/Q43265 Q43265]
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** [http://www.uniprot.org/uniprot/P43101 P43101]
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** [http://www.uniprot.org/uniprot/P43100 P43100]
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** [http://www.uniprot.org/uniprot/Q42497 Q42497]
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** [http://www.uniprot.org/uniprot/P39866 P39866]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=assimilatory_nitrate_reductase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-1.7.1.1}}
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{{#set: gene associated=Tiso_gene_16889|Tiso_gene_18918}}
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{{#set: in pathway=PWY-381}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:23, 21 March 2018

Reaction NITRATE-REDUCTASE-NADH-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • assimilatory_nitrate_reductase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADH[c] + 1 H+[c] + 1 nitrate[c] => 1 H2O[c] + 1 nitrite[c] + 1 NAD+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-381, nitrate reduction II (assimilatory): PWY-381
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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