Difference between revisions of "PWY-6260"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN] == * direction: ** L...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6260 PWY-6260] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7742 TAX-77...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6260 PWY-6260] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7742 TAX-7742]
 
* common name:
 
* common name:
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** peptide-aspartate_beta-dioxygenase
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** thyroid hormone metabolism I (via deiodination)
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** aspartyl_asparaginyl_beta-hydroxylase
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** aspartyl_asparaginylbeta-hydroxylase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.14.11.16 EC-1.14.11.16]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''12''' reactions in the full pathway
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** 1 [[Protein-L-Aspartates]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[Peptide-3-hydroxy-L-Aspartates]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* [[RXN-10604]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 a [protein]-L-aspartate[c] '''+''' 1 oxygen[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 a [protein]-3-hydroxy-L-aspartate[c] '''+''' 1 succinate[c] '''+''' 1 CO2[c]
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*** [[Tiso_gene_20481]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-12037]]
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* Gene: [[Tiso_gene_7631]]
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** 1 associated gene(s):
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_20481]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** 1 reconstruction source(s) associated:
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* Gene: [[Tiso_gene_19054]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
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* [[THYROXINE-DEIODINASE-RXN]]
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* Gene: [[Tiso_gene_17313]]
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** 1 associated gene(s):
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_20481]]
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* Gene: [[Tiso_gene_10501]]
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_17769]]
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== Reaction(s) not found ==
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=1.97.1.11-RXN 1.97.1.11-RXN]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10605 RXN-10605]
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* Gene: [[Tiso_gene_19156]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12030 RXN-12030]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12031 RXN-12031]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12032 RXN-12032]
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* Gene: [[Tiso_gene_16225]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12033 RXN-12033]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12034 RXN-12034]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12035 RXN-12035]
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* Gene: [[Tiso_gene_7632]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12036 RXN-12036]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-7742}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11508 11508]
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{{#set: common name=thyroid hormone metabolism I (via deiodination)}}
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* LIGAND-RXN:
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{{#set: reaction found=3}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04073 R04073]
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{{#set: total reaction=12}}
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* UNIPROT:
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{{#set: completion rate=25.0}}
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** [http://www.uniprot.org/uniprot/Q28056 Q28056]
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** [http://www.uniprot.org/uniprot/Q93178 Q93178]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=peptide-aspartate_beta-dioxygenase}}
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{{#set: common name=aspartyl_asparaginyl_beta-hydroxylase}}
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{{#set: common name=aspartyl_asparaginylbeta-hydroxylase}}
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{{#set: ec number=EC-1.14.11.16}}
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{{#set: gene associated=Tiso_gene_7631|Tiso_gene_19054|Tiso_gene_17313|Tiso_gene_10501|Tiso_gene_17769|Tiso_gene_19156|Tiso_gene_16225|Tiso_gene_7632}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:23, 21 March 2018

Pathway PWY-6260

  • taxonomic range:
  • common name:
    • thyroid hormone metabolism I (via deiodination)
  • Synonym(s):

Reaction(s) found

3 reactions found over 12 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6260&oldid=41247"