Difference between revisions of "PWY-6481"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPCARBTRANS-RXN ASPCARBTRANS-RXN] == * direction: ** REVERSIBLE * common name: ** protein_pyr1-3 *...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6481 PWY-6481] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] **...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPCARBTRANS-RXN ASPCARBTRANS-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6481 PWY-6481] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
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** protein_pyr1-3
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** L-dopachrome biosynthesis
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* ec number:
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** [http://enzyme.expasy.org/EC/2.1.3.2 EC-2.1.3.2]
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* Synonym(s):
 
* Synonym(s):
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** melanin biosynthesis (proximal phase)
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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  '''3''' reactions found over '''3''' reactions in the full pathway
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** 1 [[CARBAMOYL-P]][c] '''+''' 1 [[L-ASPARTATE]][c] '''<=>''' 1 [[CARBAMYUL-L-ASPARTATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
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* [[MONOPHENOL-MONOOXYGENASE-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 carbamoyl phosphate[c] '''+''' 1 L-aspartate[c] '''<=>''' 1 N-carbamoyl-L-aspartate[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c]
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*** [[Tiso_gene_1791]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-11369]]
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* [[Tiso_gene_13527]]
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** 0 associated gene:
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** IN-SILICO_ANNOTATION
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** 1 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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** EXPERIMENTAL_ANNOTATION
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* [[RXN-8483]]
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***EC-NUMBER
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** 0 associated gene:
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** [[pantograph]]-[[athaliana]]
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** 1 reconstruction source(s) associated:
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** [[pantograph]]-[[synechocystis]]
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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== Reaction(s) not found ==
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways ==
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* [[PWY-7790]], UMP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7790 PWY-7790]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7791]], UMP biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7791 PWY-7791]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5686]], UMP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20013 20013]
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{{#set: taxonomic range=TAX-2759}}
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* LIGAND-RXN:
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{{#set: common name=L-dopachrome biosynthesis}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01397 R01397]
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{{#set: common name=melanin biosynthesis (proximal phase)}}
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* UNIPROT:
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{{#set: reaction found=3}}
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** [http://www.uniprot.org/uniprot/P08955 P08955]
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{{#set: total reaction=3}}
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** [http://www.uniprot.org/uniprot/P27708 P27708]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/Q04595 Q04595]
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** [http://www.uniprot.org/uniprot/Q59711 Q59711]
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** [http://www.uniprot.org/uniprot/Q91437 Q91437]
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** [http://www.uniprot.org/uniprot/P65616 P65616]
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** [http://www.uniprot.org/uniprot/Q59712 Q59712]
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** [http://www.uniprot.org/uniprot/Q9CF79 Q9CF79]
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** [http://www.uniprot.org/uniprot/Q58976 Q58976]
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** [http://www.uniprot.org/uniprot/P08421 P08421]
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** [http://www.uniprot.org/uniprot/P0A786 P0A786]
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** [http://www.uniprot.org/uniprot/P0A7F3 P0A7F3]
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** [http://www.uniprot.org/uniprot/P19936 P19936]
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** [http://www.uniprot.org/uniprot/Q58801 Q58801]
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** [http://www.uniprot.org/uniprot/Q9PNJ6 Q9PNJ6]
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** [http://www.uniprot.org/uniprot/P05654 P05654]
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** [http://www.uniprot.org/uniprot/P0A1Z4 P0A1Z4]
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** [http://www.uniprot.org/uniprot/P19910 P19910]
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** [http://www.uniprot.org/uniprot/P07259 P07259]
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** [http://www.uniprot.org/uniprot/P20054 P20054]
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** [http://www.uniprot.org/uniprot/P05990 P05990]
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** [http://www.uniprot.org/uniprot/Q06950 Q06950]
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** [http://www.uniprot.org/uniprot/Q09027 Q09027]
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** [http://www.uniprot.org/uniprot/P49077 P49077]
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** [http://www.uniprot.org/uniprot/Q9S983 Q9S983]
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** [http://www.uniprot.org/uniprot/Q09794 Q09794]
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** [http://www.uniprot.org/uniprot/P74163 P74163]
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** [http://www.uniprot.org/uniprot/Q43064 Q43064]
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** [http://www.uniprot.org/uniprot/Q43086 Q43086]
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** [http://www.uniprot.org/uniprot/Q43087 Q43087]
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** [http://www.uniprot.org/uniprot/Q84493 Q84493]
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** [http://www.uniprot.org/uniprot/Q9UAH8 Q9UAH8]
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** [http://www.uniprot.org/uniprot/Q60252 Q60252]
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** [http://www.uniprot.org/uniprot/P96174 P96174]
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** [http://www.uniprot.org/uniprot/P96175 P96175]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=protein_pyr1-3}}
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{{#set: ec number=EC-2.1.3.2}}
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{{#set: gene associated=Tiso_gene_13527}}
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{{#set: in pathway=PWY-7790|PWY-7791|PWY-5686}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:23, 21 March 2018

Pathway PWY-6481

  • taxonomic range:
  • common name:
    • L-dopachrome biosynthesis
  • Synonym(s):
    • melanin biosynthesis (proximal phase)

Reaction(s) found

3 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6481&oldid=41254"