Difference between revisions of "PWY-4321"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-SULFINOALANINE-AMINOTRANSFERASE-RXN 3-SULFINOALANINE-AMINOTRANSFERASE-RXN] == * direction: ** REV...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4321 PWY-4321] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-SULFINOALANINE-AMINOTRANSFERASE-RXN 3-SULFINOALANINE-AMINOTRANSFERASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4321 PWY-4321] ==
* direction:
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* taxonomic range:
** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
* ec number:
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* common name:
** [http://enzyme.expasy.org/EC/2.6.1 EC-2.6.1]
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** L-glutamate degradation IV
 
* Synonym(s):
 
* Synonym(s):
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** GABA shunt
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** 4-aminobutyrate shunt
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** γ-aminobutyrate shunt
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''4''' reactions found over '''5''' reactions in the full pathway
** 1 [[3-SULFINOALANINE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[3-SULFINYL-PYRUVATE]][c] '''+''' 1 [[GLT]][c]
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* [[GABATRANSAM-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1 3-sulfinoalanine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 3-sulfinopyruvate[c] '''+''' 1 L-glutamate[c]
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*** [[Tiso_gene_11231]]
 
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** 1 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[orthology-synechocystis]]
Genes have been associated with this reaction based on different elements listed below.
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* [[GLUTDECARBOX-RXN]]
* [[Tiso_gene_17718]]
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** 2 associated gene(s):
** [[pantograph]]-[[athaliana]]
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*** [[Tiso_gene_10395]]
** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_9927]]
== Pathways  ==
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** 4 reconstruction source(s) associated:
* [[CYSTEINE-DEG-PWY]], L-cysteine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE-DEG-PWY CYSTEINE-DEG-PWY]
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*** [[annotation-in-silico_annotation]]
** '''2''' reactions found over '''3''' reactions in the full pathway
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*** [[orthology-athaliana]]
== Reconstruction information  ==
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*** [[orthology-creinhardtii]]
* [[orthology]]:
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*** [[orthology-synechocystis]]
** [[pantograph]]:
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* [[RXN-6903]]
*** [[athaliana]]
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** 2 associated gene(s):
*** [[esiliculosus]]
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*** [[Tiso_gene_91]]
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*** [[Tiso_gene_777]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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* [[SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_777]]
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*** [[Tiso_gene_91]]
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*** [[Tiso_gene_6952]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-creinhardtii]]
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6902 RXN-6902]
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
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* ARACYC:
** [http://www.genome.jp/dbget-bin/www_bget?R02619 R02619]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-4321 PWY-4321]
{{#set: direction=REVERSIBLE}}
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{{#set: taxonomic range=TAX-33090}}
{{#set: ec number=EC-2.6.1}}
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{{#set: common name=L-glutamate degradation IV}}
{{#set: gene associated=Tiso_gene_17718}}
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{{#set: common name=GABA shunt|4-aminobutyrate shunt|&gamma;-aminobutyrate shunt}}
{{#set: in pathway=CYSTEINE-DEG-PWY}}
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{{#set: reaction found=4}}
{{#set: reconstruction category=orthology}}
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{{#set: total reaction=5}}
{{#set: reconstruction tool=pantograph}}
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{{#set: completion rate=80.0}}
{{#set: reconstruction source=athaliana|esiliculosus}}
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Latest revision as of 20:23, 21 March 2018

Pathway PWY-4321

  • taxonomic range:
  • common name:
    • L-glutamate degradation IV
  • Synonym(s):
    • GABA shunt
    • 4-aminobutyrate shunt
    • γ-aminobutyrate shunt

Reaction(s) found

4 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links