Difference between revisions of "PWY-7382"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14227 RXN-14227] == * direction: ** LEFT-TO-RIGHT * common name: ** 5_deoxy_cytosolic_type_c_pr...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7382 PWY-7382] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14227 RXN-14227] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7382 PWY-7382] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
* common name:
 
* common name:
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** 5_deoxy_cytosolic_type_c_protein
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** lipoate biosynthesis and incorporation (yeast)
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** 5_-nucleotidase
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** probable_cytosolic_imp-gmp_specific_5_-nucleotidase
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''7''' reactions in the full pathway
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** 1 [[WATER]][c] '''+''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[CPD-8259]][c]
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* [[RXN-13037]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 H2O[c] '''+''' 1 β-nicotinate D-ribonucleotide[c] '''=>''' 1 phosphate[c] '''+''' 1 β-D-ribosylnicotinate[c]
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*** [[Tiso_gene_4494]]
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*** [[Tiso_gene_4493]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_6640]]
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* [[RXN-14950]]
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** Source: [[orthology-esiliculosus]]
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** 2 associated gene(s):
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* Gene: [[Tiso_gene_5911]]
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*** [[Tiso_gene_437]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_8049]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** 1 reconstruction source(s) associated:
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* Gene: [[Tiso_gene_14434]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-14957]]
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*** Assignment: EC-NUMBER
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** 2 associated gene(s):
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* Gene: [[Tiso_gene_6988]]
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*** [[Tiso_gene_437]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_8049]]
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*** Assignment: EC-NUMBER
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_14246]]
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* [[RXN-14959]]
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** Source: [[annotation-in-silico_annotation]]
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** 2 associated gene(s):
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*** Assignment: EC-NUMBER
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*** [[Tiso_gene_8049]]
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* Gene: [[Tiso_gene_14435]]
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*** [[Tiso_gene_437]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 reconstruction source(s) associated:
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*** Assignment: EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_13929]]
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== Reaction(s) not found ==
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14954 RXN-14954]
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*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14955 RXN-14955]
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** Source: [[orthology-esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14958 RXN-14958]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30938 30938]
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{{#set: common name=lipoate biosynthesis and incorporation (yeast)}}
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* LIGAND-RXN:
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{{#set: reaction found=4}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03346 R03346]
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{{#set: total reaction=7}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=57.0}}
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{{#set: common name=5_deoxy_cytosolic_type_c_protein}}
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{{#set: common name=5_-nucleotidase}}
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{{#set: common name=probable_cytosolic_imp-gmp_specific_5_-nucleotidase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-3.1.3.5}}
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{{#set: gene associated=Tiso_gene_6640|Tiso_gene_5911|Tiso_gene_14434|Tiso_gene_6988|Tiso_gene_14246|Tiso_gene_14435|Tiso_gene_13929}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:23, 21 March 2018

Pathway PWY-7382

  • taxonomic range:
  • common name:
    • lipoate biosynthesis and incorporation (yeast)
  • Synonym(s):

Reaction(s) found

4 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7382&oldid=41270"