Difference between revisions of "RXN-8001"

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(Created page with "Category:Gene == Gene Tiso_gene_13306 == * right end position: ** 6380 * transcription direction: ** POSITIVE * left end position: ** 3486 * centisome position: ** 54.5710...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8001 RXN-8001] == * direction: ** LEFT-TO-RIGHT * common name: ** histidinol_dehydrogenase * ec...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_13306 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8001 RXN-8001] ==
* right end position:
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* direction:
** 6380
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** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** POSITIVE
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** histidinol_dehydrogenase
* left end position:
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* ec number:
** 3486
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** [http://enzyme.expasy.org/EC/1.1.1.23 EC-1.1.1.23]
* centisome position:
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** 54.571068   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* Reaction: [[3.2.1.21-RXN]]
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* With identifiers:
** Source: [[annotation-in-silico_annotation]]
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** 1 [[WATER]][c] '''+''' 2 [[NAD]][c] '''+''' 1 [[HISTIDINOL]][c] '''=>''' 1 [[HIS]][c] '''+''' 2 [[NADH]][c] '''+''' 3 [[PROTON]][c]
*** Assignment: ec-number
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* With common name(s):
* Reaction: [[RXN-10769]]
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** 1 H2O[c] '''+''' 2 NAD+[c] '''+''' 1 histidinol[c] '''=>''' 1 L-histidine[c] '''+''' 2 NADH[c] '''+''' 3 H+[c]
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
* Reaction: [[RXN-10773]]
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Genes have been associated with this reaction based on different elements listed below.
** Source: [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_11386]]
*** Assignment: ec-number
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* Reaction: [[RXN-13602]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13603]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14179]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-5341]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-8036]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
*** Assignment: ec-number
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*** Assignment: EC-NUMBER
* Reaction: [[RXN-9674]]
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** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
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** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_7381]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
*** Assignment: ec-number
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*** Tool: [[pathwaytools]]
== Pathways associated ==
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** Source: [[annotation-experimental_annotation]]
* [[PWY-3121]]
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*** Tool: [[pathwaytools]]
* [[PWY-6002]]
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* [[PWY-6788]]
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* [[PWY-5176]]
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* [[PWY-7092]]
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* [[PWY-7091]]
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== External links  ==
 
== External links  ==
{{#set: right end position=6380}}
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* RHEA:
{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20641 20641]
{{#set: left end position=3486}}
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* LIGAND-RXN:
{{#set: centisome position=54.571068    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01158 R01158]
{{#set: reaction associated=3.2.1.21-RXN|RXN-10769|RXN-10773|RXN-13602|RXN-13603|RXN-14179|RXN-5341|RXN-8036|RXN-9674}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: pathway associated=PWY-3121|PWY-6002|PWY-6788|PWY-5176|PWY-7092|PWY-7091}}
+
{{#set: common name=histidinol_dehydrogenase}}
 +
{{#set: ec number=EC-1.1.1.23}}
 +
{{#set: gene associated=Tiso_gene_11386|Tiso_gene_7381}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:23, 21 March 2018

Reaction RXN-8001

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • histidinol_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 2 NAD+[c] + 1 histidinol[c] => 1 L-histidine[c] + 2 NADH[c] + 3 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links