Difference between revisions of "Tiso gene 13306"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8001 RXN-8001] == * direction: ** LEFT-TO-RIGHT * common name: ** histidinol_dehydrogenase * ec...")
(Created page with "Category:Gene == Gene Tiso_gene_13306 == * right end position: ** 6380 * transcription direction: ** POSITIVE * left end position: ** 3486 * centisome position: ** 54.5710...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8001 RXN-8001] ==
+
== Gene Tiso_gene_13306 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 6380
−
* common name:
+
* transcription direction:
−
** histidinol_dehydrogenase
+
** POSITIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/1.1.1.23 EC-1.1.1.23]
+
** 3486
 +
* centisome position:
 +
** 54.571068   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[3.2.1.21-RXN]]
−
** 1 [[HISTIDINOL]][c] '''+''' 2 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[HIS]][c] '''+''' 2 [[NADH]][c] '''+''' 3 [[PROTON]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 histidinol[c] '''+''' 2 NAD+[c] '''+''' 1 H2O[c] '''=>''' 1 L-histidine[c] '''+''' 2 NADH[c] '''+''' 3 H+[c]
+
* Reaction: [[RXN-10769]]
−
 
+
** Source: [[annotation-in-silico_annotation]]
−
== Genes associated with this reaction  ==
+
*** Assignment: ec-number
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[RXN-10773]]
−
* [[Tiso_gene_7381]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: ec-number
−
* [[Tiso_gene_11386]]
+
* Reaction: [[RXN-13602]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: ec-number
−
** EXPERIMENTAL_ANNOTATION
+
* Reaction: [[RXN-13603]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: ec-number
−
** [[pantograph]]-[[creinhardtii]]
+
* Reaction: [[RXN-14179]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
−
== Pathways  ==
+
*** Assignment: ec-number
−
== Reconstruction information  ==
+
* Reaction: [[RXN-5341]]
−
* [[orthology]]:
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]:
+
*** Assignment: ec-number
−
*** [[creinhardtii]]
+
* Reaction: [[RXN-8036]]
−
*** [[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[manual]]:
+
*** Assignment: ec-number
−
** [[primary_network]]
+
* Reaction: [[RXN-9674]]
−
* [[annotation]]:
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pathwaytools]]:
+
*** Assignment: ec-number
−
*** [[experimental_annotation]]
+
== Pathways associated ==
−
*** [[in-silico_annotation]]
+
* [[PWY-3121]]
 +
* [[PWY-6002]]
 +
* [[PWY-6788]]
 +
* [[PWY-5176]]
 +
* [[PWY-7092]]
 +
* [[PWY-7091]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=6380}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20641 20641]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=3486}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01158 R01158]
+
{{#set: centisome position=54.571068    }}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction associated=3.2.1.21-RXN|RXN-10769|RXN-10773|RXN-13602|RXN-13603|RXN-14179|RXN-5341|RXN-8036|RXN-9674}}
−
{{#set: common name=histidinol_dehydrogenase}}
+
{{#set: pathway associated=PWY-3121|PWY-6002|PWY-6788|PWY-5176|PWY-7092|PWY-7091}}
−
{{#set: ec number=EC-1.1.1.23}}
+
−
{{#set: gene associated=Tiso_gene_7381|Tiso_gene_11386}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|esiliculosus}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 20:23, 21 March 2018

Gene Tiso_gene_13306

  • right end position:
    • 6380
  • transcription direction:
    • POSITIVE
  • left end position:
    • 3486
  • centisome position:
    • 54.571068
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13306&oldid=41280"