Difference between revisions of "PWY-6352"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8001 RXN-8001] == * direction: ** LEFT-TO-RIGHT * common name: ** histidinol_dehydrogenase * ec...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6352 PWY-6352] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8001 RXN-8001] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6352 PWY-6352] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
−
** histidinol_dehydrogenase
+
** 3-phosphoinositide biosynthesis
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.1.1.23 EC-1.1.1.23]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** phosphatidylinositol-3,4-bisphosphate biosynthesis
 +
** phosphatidylinositol 3-phosphate biosynthesis
 +
** phosphatidylinositol-3,4,5-triphosphate biosynthesis
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''3''' reactions found over '''8''' reactions in the full pathway
−
** 1 [[WATER]][c] '''+''' 2 [[NAD]][c] '''+''' 1 [[HISTIDINOL]][c] '''=>''' 1 [[HIS]][c] '''+''' 2 [[NADH]][c] '''+''' 3 [[PROTON]][c]
+
* [[1-PHOSPHATIDYLINOSITOL-KINASE-RXN]]
−
* With common name(s):
+
** 7 associated gene(s):
−
** 1 H2O[c] '''+''' 2 NAD+[c] '''+''' 1 histidinol[c] '''=>''' 1 L-histidine[c] '''+''' 2 NADH[c] '''+''' 3 H+[c]
+
*** [[Tiso_gene_18530]]
−
 
+
*** [[Tiso_gene_12389]]
−
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_2572]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Tiso_gene_18529]]
−
* Gene: [[Tiso_gene_11386]]
+
*** [[Tiso_gene_17239]]
−
** Source: [[annotation-in-silico_annotation]]
+
*** [[Tiso_gene_17238]]
−
*** Assignment: EC-NUMBER
+
*** [[Tiso_gene_17240]]
−
** Source: [[annotation-experimental_annotation]]
+
** 3 reconstruction source(s) associated:
−
*** Assignment: EC-NUMBER
+
*** [[annotation-experimental_annotation]]
−
** Source: [[orthology-esiliculosus]]
+
*** [[annotation-in-silico_annotation]]
−
** Source: [[orthology-creinhardtii]]
+
*** [[orthology-esiliculosus]]
−
** Source: [[orthology-creinhardtii]]
+
* [[2.7.1.68-RXN]]
−
* Gene: [[Tiso_gene_7381]]
+
** 16 associated gene(s):
−
** Source: [[orthology-esiliculosus]]
+
*** [[Tiso_gene_2021]]
−
== Pathways  ==
+
*** [[Tiso_gene_17532]]
−
== Reconstruction information  ==
+
*** [[Tiso_gene_1131]]
−
* Category: [[orthology]]
+
*** [[Tiso_gene_15721]]
−
** Source: [[orthology-creinhardtii]]
+
*** [[Tiso_gene_14966]]
−
*** Tool: [[pantograph]]
+
*** [[Tiso_gene_2350]]
−
** Source: [[orthology-esiliculosus]]
+
*** [[Tiso_gene_11381]]
−
*** Tool: [[pantograph]]
+
*** [[Tiso_gene_15722]]
−
* Category: [[manual]]
+
*** [[Tiso_gene_14055]]
−
** Source: [[manual-primary_network]]
+
*** [[Tiso_gene_17887]]
−
* Category: [[annotation]]
+
*** [[Tiso_gene_9590]]
−
** Source: [[annotation-in-silico_annotation]]
+
*** [[Tiso_gene_2008]]
−
*** Tool: [[pathwaytools]]
+
*** [[Tiso_gene_730]]
−
** Source: [[annotation-experimental_annotation]]
+
*** [[Tiso_gene_9249]]
−
*** Tool: [[pathwaytools]]
+
*** [[Tiso_gene_18887]]
 +
*** [[Tiso_gene_7487]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[2.7.8.11-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_6541]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.150-RXN 2.7.1.150-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.153-RXN 2.7.1.153-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.154-RXN 2.7.1.154-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10938 RXN-10938]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: taxonomic range=TAX-2759}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20641 20641]
+
{{#set: common name=3-phosphoinositide biosynthesis}}
−
* LIGAND-RXN:
+
{{#set: common name=phosphatidylinositol-3,4-bisphosphate biosynthesis|phosphatidylinositol 3-phosphate biosynthesis|phosphatidylinositol-3,4,5-triphosphate biosynthesis}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01158 R01158]
+
{{#set: reaction found=3}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: total reaction=8}}
−
{{#set: common name=histidinol_dehydrogenase}}
+
{{#set: completion rate=38.0}}
−
{{#set: ec number=EC-1.1.1.23}}
+
−
{{#set: gene associated=Tiso_gene_11386|Tiso_gene_7381}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
−
{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:23, 21 March 2018

Pathway PWY-6352

  • taxonomic range:
  • common name:
    • 3-phosphoinositide biosynthesis
  • Synonym(s):
    • phosphatidylinositol-3,4-bisphosphate biosynthesis
    • phosphatidylinositol 3-phosphate biosynthesis
    • phosphatidylinositol-3,4,5-triphosphate biosynthesis

Reaction(s) found

3 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6352&oldid=41281"