Difference between revisions of "Tiso gene 4232"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14227 RXN-14227] == * direction: ** LEFT-TO-RIGHT * common name: ** 5_deoxy_cytosolic_type_c_pr...")
(Created page with "Category:Gene == Gene Tiso_gene_4232 == * right end position: ** 4047 * transcription direction: ** POSITIVE * left end position: ** 2024 * centisome position: ** 9.814284...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14227 RXN-14227] ==
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== Gene Tiso_gene_4232 ==
* direction:
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* right end position:
** LEFT-TO-RIGHT
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** 4047
* common name:
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* transcription direction:
** 5_deoxy_cytosolic_type_c_protein
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** POSITIVE
** 5_-nucleotidase
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* left end position:
** probable_cytosolic_imp-gmp_specific_5_-nucleotidase
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** 2024
** ORF
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* centisome position:
* ec number:
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** 9.814284   
** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* Reaction: [[PHENYLALANINE--TRNA-LIGASE-RXN]]
** 1 [[WATER]][c] '''+''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[CPD-8259]][c]
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** Source: [[annotation-in-silico_annotation]]
* With common name(s):
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*** Assignment: ec-number
** 1 H2O[c] '''+''' 1 β-nicotinate D-ribonucleotide[c] '''=>''' 1 phosphate[c] '''+''' 1 β-D-ribosylnicotinate[c]
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** Source: [[annotation-experimental_annotation]]
 
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*** Assignment: ec-number
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_6988]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6640]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5911]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_14246]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13929]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14434]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14435]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
*** Tool: [[pantograph]]
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== Pathways associated ==
* Category: [[annotation]]
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* [[TRNA-CHARGING-PWY]]
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: right end position=4047}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30938 30938]
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{{#set: transcription direction=POSITIVE}}
* LIGAND-RXN:
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{{#set: left end position=2024}}
** [http://www.genome.jp/dbget-bin/www_bget?R03346 R03346]
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{{#set: centisome position=9.814284    }}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=PHENYLALANINE--TRNA-LIGASE-RXN}}
{{#set: common name=5_deoxy_cytosolic_type_c_protein}}
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
{{#set: common name=5_-nucleotidase}}
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{{#set: common name=probable_cytosolic_imp-gmp_specific_5_-nucleotidase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-3.1.3.5}}
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{{#set: gene associated=Tiso_gene_6988|Tiso_gene_6640|Tiso_gene_5911|Tiso_gene_14246|Tiso_gene_13929|Tiso_gene_14434|Tiso_gene_14435}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:23, 21 March 2018

Gene Tiso_gene_4232

  • right end position:
    • 4047
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2024
  • centisome position:
    • 9.814284
  • Synonym(s):

Reactions associated

Pathways associated

External links