Difference between revisions of "CPD-5168"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BADH-RXN BADH-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/1.2.1...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-5168 CPD-5168] == * common name: ** α-D-Man-(1→2)-α-D-Man-(1→2)-&alph...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BADH-RXN BADH-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-5168 CPD-5168] ==
* direction:
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* common name:
** REVERSIBLE
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** α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol
* ec number:
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** [http://enzyme.expasy.org/EC/1.2.1.8 EC-1.2.1.8]
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* Synonym(s):
 
* Synonym(s):
 +
** an {α-D-mannosyl-(1->2)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1,6)]-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1->4)-N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}diphosphodolichol
 +
** {α-D-mannosyl-(1->2)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1,6)]-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1->4)-N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}diphosphodolichol
 +
** a (mannosyl)9-(N-acetylglucosaminyl)2-diphosphodolichol
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[RXN-5470]]
** 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[BETAINE_ALDEHYDE]][c] '''<=>''' 1 [[BETAINE]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
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== Reaction(s) known to produce the compound ==
* With common name(s):
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* [[RXN-5469]]
** 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 betaine aldehyde[c] '''<=>''' 1 glycine betaine[c] '''+''' 1 NADH[c] '''+''' 2 H+[c]
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== Reaction(s) of unknown directionality ==
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_3513]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[CHOLINE-BETAINE-ANA-PWY]], choline degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-BETAINE-ANA-PWY CHOLINE-BETAINE-ANA-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY1F-353]], glycine betaine biosynthesis III (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-353 PWY1F-353]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7494]], choline degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7494 PWY-7494]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[BETSYN-PWY]], glycine betaine biosynthesis I (Gram-negative bacteria): [http://metacyc.org/META/NEW-IMAGE?object=BETSYN-PWY BETSYN-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-3722]], glycine betaine biosynthesis II (Gram-positive bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3722 PWY-3722]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: common name=&alpha;-D-Man-(1&rarr;2)-&alpha;-D-Man-(1&rarr;2)-&alpha;-D-Man-(1&rarr;3)-[&alpha;-D-Man-(1&rarr;2)-&alpha;-D-Man-(1&rarr;3)-[&alpha;-D-Man-(1&rarr;2)-&alpha;-D-Man-(1&rarr;6)]-&alpha;-D-Man-(1&rarr;6)]-&beta;-D-Man-(1&rarr;4)-&beta;-D-GlcNAc-(1&rarr;4)-&alpha;-D-GlcNAc-diphosphodolichol}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30070 30070]
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{{#set: common name=an {&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->3)-[&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->3)-[&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1,6)]-&alpha;-D-mannosyl-(1,6)]-&beta;-D-mannosyl-(1->4)-N-acetyl-&beta;-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}diphosphodolichol|{&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->3)-[&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->3)-[&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1,6)]-&alpha;-D-mannosyl-(1,6)]-&beta;-D-mannosyl-(1->4)-N-acetyl-&beta;-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}diphosphodolichol|a (mannosyl)9-(N-acetylglucosaminyl)2-diphosphodolichol}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15305 15305]
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{{#set: consumed by=RXN-5470}}
* LIGAND-RXN:
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{{#set: produced by=RXN-5469}}
** [http://www.genome.jp/dbget-bin/www_bget?R02565 R02565]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P17202 P17202]
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** [http://www.uniprot.org/uniprot/P17445 P17445]
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** [http://www.uniprot.org/uniprot/P28237 P28237]
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** [http://www.uniprot.org/uniprot/P42757 P42757]
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** [http://www.uniprot.org/uniprot/Q40024 Q40024]
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** [http://www.uniprot.org/uniprot/O24174 O24174]
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** [http://www.uniprot.org/uniprot/Q43828 Q43828]
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** [http://www.uniprot.org/uniprot/Q43829 Q43829]
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** [http://www.uniprot.org/uniprot/O22477 O22477]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-1.2.1.8}}
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{{#set: gene associated=Tiso_gene_3513}}
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{{#set: in pathway=CHOLINE-BETAINE-ANA-PWY|PWY1F-353|PWY-7494|BETSYN-PWY|PWY-3722}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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Latest revision as of 20:23, 21 March 2018

Metabolite CPD-5168

  • common name:
    • α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol
  • Synonym(s):
    • an {α-D-mannosyl-(1->2)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1,6)]-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1->4)-N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}diphosphodolichol
    • {α-D-mannosyl-(1->2)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1,6)]-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1->4)-N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}diphosphodolichol
    • a (mannosyl)9-(N-acetylglucosaminyl)2-diphosphodolichol

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"&alpha;-D-Man-(1&rarr;2)-&alpha;-D-Man-(1&rarr;2)-&alpha;-D-Man-(1&rarr;3)-[&alpha;-D-Man-(1&rarr;2)-&alpha;-D-Man-(1&rarr;3)-[&alpha;-D-Man-(1&rarr;2)-&alpha;-D-Man-(1&rarr;6)]-&alpha;-D-Man-(1&rarr;6)]-&beta;-D-Man-(1&rarr;4)-&beta;-D-GlcNAc-(1&rarr;4)-&alpha;-D-GlcNAc-diphosphodolichol" cannot be used as a page name in this wiki.
  • "an {&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->3)-[&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->3)-[&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1,6)]-&alpha;-D-mannosyl-(1,6)]-&beta;-D-mannosyl-(1->4)-N-acetyl-&beta;-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}diphosphodolichol" cannot be used as a page name in this wiki.
  • "{&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->3)-[&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->3)-[&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1,6)]-&alpha;-D-mannosyl-(1,6)]-&beta;-D-mannosyl-(1->4)-N-acetyl-&beta;-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}diphosphodolichol" cannot be used as a page name in this wiki.