Difference between revisions of "PWY-6824"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11637 RXN-11637] == * direction: ** LEFT-TO-RIGHT * common name: ** ribosomal_rna_small_subunit...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6824 PWY-6824] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11637 RXN-11637] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6824 PWY-6824] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
** ribosomal_rna_small_subunit_methyltransferase_i
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** justicidin B biosynthesis
* ec number:
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** [http://enzyme.expasy.org/EC/2.1.1.198 EC-2.1.1.198]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''1''' reactions found over '''6''' reactions in the full pathway
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[16S-rRNA-cytidine1402]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[16S-rRNA-2-O-methylcytidine1402]][c]
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* [[RXN-17352]]
* With common name(s):
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** 3 associated gene(s):
** 1 S-adenosyl-L-methionine[c] '''+''' 1 a cytidine1402 in 16S rRNA[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 a 2'-O-methylcytidine1402 in 16S rRNA[c]
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*** [[Tiso_gene_11016]]
 
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*** [[Tiso_gene_15820]]
== Genes associated with this reaction  ==
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*** [[Tiso_gene_15962]]
Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
* [[Tiso_gene_13501]]
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*** [[annotation-in-silico_annotation]]
** IN-SILICO_ANNOTATION
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== Reaction(s) not found ==
***AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12451 RXN-12451]
== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12591 RXN-12591]
== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17351 RXN-17351]
* [[annotation]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8677 RXN-8677]
** [[pathwaytools]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8684 RXN-8684]
*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-33090}}
{{#set: common name=ribosomal_rna_small_subunit_methyltransferase_i}}
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{{#set: common name=justicidin B biosynthesis}}
{{#set: ec number=EC-2.1.1.198}}
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{{#set: reaction found=1}}
{{#set: gene associated=Tiso_gene_13501}}
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{{#set: total reaction=6}}
{{#set: in pathway=}}
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{{#set: completion rate=17.0}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:24, 21 March 2018

Pathway PWY-6824

  • taxonomic range:
  • common name:
    • justicidin B biosynthesis
  • Synonym(s):

Reaction(s) found

1 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links