Difference between revisions of "PWY0-166"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11478 RXN-11478] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11478 RXN-11478] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://enzyme.expasy.org/EC/1.3.1.9 EC-1.3.1.9]
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* common name:
 +
** superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''12''' reactions found over '''17''' reactions in the full pathway
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** 1 [[PROTON]][c] '''+''' 1 [[Enoylglutaryl-ACP-methyl-esters]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[Glutaryl-ACP-methyl-esters]][c]
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* [[CDPREDUCT-RXN]]
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* With common name(s):
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** 4 associated gene(s):
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** 1 H+[c] '''+''' 1 an enoylglutaryl-[acp] methyl ester[c] '''+''' 1 NADH[c] '''=>''' 1 NAD+[c] '''+''' 1 a glutaryl-[acp] methyl ester[c]
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*** [[Tiso_gene_10617]]
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*** [[Tiso_gene_9916]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_9915]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_10138]]
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* [[Tiso_gene_10778]]
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** 6 reconstruction source(s) associated:
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** [[pantograph]]-[[esiliculosus]]
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*** [[annotation-experimental_annotation]]
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== Pathways  ==
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*** [[orthology-esiliculosus]]
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* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6519 PWY-6519]
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*** [[annotation-in-silico_annotation]]
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** '''9''' reactions found over '''11''' reactions in the full pathway
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*** [[orthology-athaliana]]
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== Reconstruction information  ==
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*** [[orthology-synechocystis]]
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* [[orthology]]:
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*** [[manual-primary_network]]
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** [[pantograph]]:
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* [[DCDPKIN-RXN]]
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*** [[esiliculosus]]
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** 6 associated gene(s):
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*** [[Tiso_gene_9290]]
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*** [[Tiso_gene_17271]]
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*** [[Tiso_gene_17272]]
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*** [[Tiso_gene_195]]
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*** [[Tiso_gene_18224]]
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*** [[Tiso_gene_16529]]
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** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
* [[DTDPKIN-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_18224]]
 +
*** [[Tiso_gene_16529]]
 +
*** [[Tiso_gene_195]]
 +
*** [[Tiso_gene_17271]]
 +
*** [[Tiso_gene_17272]]
 +
*** [[Tiso_gene_9290]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
* [[DTMPKI-RXN]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_3755]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[DUDPKIN-RXN]]
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** 6 associated gene(s):
 +
*** [[Tiso_gene_17272]]
 +
*** [[Tiso_gene_16529]]
 +
*** [[Tiso_gene_18224]]
 +
*** [[Tiso_gene_195]]
 +
*** [[Tiso_gene_9290]]
 +
*** [[Tiso_gene_17271]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
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* [[DUTP-PYROP-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_18793]]
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*** [[Tiso_gene_18792]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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* [[PWY-7184]]
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** 0 associated gene:
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* [[PWY-7187]]
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** 0 associated gene:
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* [[RIBONUCLEOSIDE-DIP-REDUCTII-RXN]]
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** 4 associated gene(s):
 +
*** [[Tiso_gene_9915]]
 +
*** [[Tiso_gene_10138]]
 +
*** [[Tiso_gene_9916]]
 +
*** [[Tiso_gene_10617]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN0-722]]
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** 4 associated gene(s):
 +
*** [[Tiso_gene_10617]]
 +
*** [[Tiso_gene_10138]]
 +
*** [[Tiso_gene_9915]]
 +
*** [[Tiso_gene_9916]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[THYMIDYLATESYN-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_7708]]
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*** [[Tiso_gene_18478]]
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** 2 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[UDPREDUCT-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_9915]]
 +
*** [[Tiso_gene_9916]]
 +
*** [[Tiso_gene_10138]]
 +
*** [[Tiso_gene_10617]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=DCTP-DEAM-RXN DCTP-DEAM-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-723 RXN0-723]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-724 RXN0-724]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* ECOCYC:
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{{#set: ec number=EC-1.3.1.9}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY0-166 PWY0-166]
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{{#set: gene associated=Tiso_gene_10778}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: in pathway=PWY-6519}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: reconstruction category=orthology}}
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{{#set: common name=superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reaction found=12}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: total reaction=17}}
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{{#set: completion rate=71.0}}

Latest revision as of 19:25, 21 March 2018

Pathway PWY0-166

  • taxonomic range:
  • common name:
    • superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)
  • Synonym(s):

Reaction(s) found

12 reactions found over 17 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY0-166&oldid=41552"