Difference between revisions of "PWY0-166"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY] == * taxonomic range:...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
 
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** 4-hydroxyphenylacetate degradation
+
** superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)
 
* Synonym(s):
 
* Synonym(s):
−
** 4-HPA degradation
 
−
** homoprotocatechuate degradation
 
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''2''' reactions found over '''8''' reactions in the full pathway
+
  '''12''' reactions found over '''17''' reactions in the full pathway
−
* [[4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN]]
+
* [[CDPREDUCT-RXN]]
−
** 1 associated gene(s):
+
** 4 associated gene(s):
−
*** [[Tiso_gene_13940]]
+
*** [[Tiso_gene_10617]]
−
** 2 reconstruction source(s) associated:
+
*** [[Tiso_gene_9916]]
 +
*** [[Tiso_gene_9915]]
 +
*** [[Tiso_gene_10138]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 
*** [[orthology-athaliana]]
 
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
* [[DCDPKIN-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_9290]]
 +
*** [[Tiso_gene_17271]]
 +
*** [[Tiso_gene_17272]]
 +
*** [[Tiso_gene_195]]
 +
*** [[Tiso_gene_18224]]
 +
*** [[Tiso_gene_16529]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
* [[SUCCSEMIALDDEHYDROG-RXN]]
+
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
* [[DTDPKIN-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_18224]]
 +
*** [[Tiso_gene_16529]]
 +
*** [[Tiso_gene_195]]
 +
*** [[Tiso_gene_17271]]
 +
*** [[Tiso_gene_17272]]
 +
*** [[Tiso_gene_9290]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
* [[DTMPKI-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
−
*** [[Tiso_gene_6952]]
+
*** [[Tiso_gene_3755]]
−
** 1 reconstruction source(s) associated:
+
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[DUDPKIN-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_17272]]
 +
*** [[Tiso_gene_16529]]
 +
*** [[Tiso_gene_18224]]
 +
*** [[Tiso_gene_195]]
 +
*** [[Tiso_gene_9290]]
 +
*** [[Tiso_gene_17271]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
* [[DUTP-PYROP-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_18793]]
 +
*** [[Tiso_gene_18792]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
* [[PWY-7184]]
 +
** 0 associated gene:
 +
* [[PWY-7187]]
 +
** 0 associated gene:
 +
* [[RIBONUCLEOSIDE-DIP-REDUCTII-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_9915]]
 +
*** [[Tiso_gene_10138]]
 +
*** [[Tiso_gene_9916]]
 +
*** [[Tiso_gene_10617]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN0-722]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_10617]]
 +
*** [[Tiso_gene_10138]]
 +
*** [[Tiso_gene_9915]]
 +
*** [[Tiso_gene_9916]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[THYMIDYLATESYN-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_7708]]
 +
*** [[Tiso_gene_18478]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[UDPREDUCT-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_9915]]
 +
*** [[Tiso_gene_9916]]
 +
*** [[Tiso_gene_10138]]
 +
*** [[Tiso_gene_10617]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 
*** [[orthology-synechocystis]]
 
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=1.13.11.15-RXN 1.13.11.15-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=DCTP-DEAM-RXN DCTP-DEAM-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=4.1.1.68-RXN 4.1.1.68-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-723 RXN0-723]
−
* [http://metacyc.org/META/NEW-IMAGE?object=5.3.3.10-RXN 5.3.3.10-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-724 RXN0-724]
−
* [http://metacyc.org/META/NEW-IMAGE?object=CHMS-DEHYDROGENASE-RXN CHMS-DEHYDROGENASE-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYHEPTA-DIENEDIOATE-HYDROXY-RXN HYDROXYHEPTA-DIENEDIOATE-HYDROXY-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8505 RXN-8505]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-1224}}
+
* ECOCYC:
−
{{#set: common name=4-hydroxyphenylacetate degradation}}
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY0-166 PWY0-166]
−
{{#set: common name=4-HPA degradation|homoprotocatechuate degradation}}
+
{{#set: taxonomic range=TAX-2157}}
−
{{#set: reaction found=2}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: total reaction=8}}
+
{{#set: common name=superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)}}
−
{{#set: completion rate=25.0}}
+
{{#set: reaction found=12}}
 +
{{#set: total reaction=17}}
 +
{{#set: completion rate=71.0}}

Latest revision as of 19:25, 21 March 2018

Pathway PWY0-166

  • taxonomic range:
  • common name:
    • superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)
  • Synonym(s):

Reaction(s) found

12 reactions found over 17 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY0-166&oldid=41552"