Difference between revisions of "HISTCYCLOHYD-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12710 RXN-12710] == * direction: ** LEFT-TO-RIGHT * common name: ** acetyl-_c-acetyltransferase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTCYCLOHYD-RXN HISTCYCLOHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** probable_phos...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12710 RXN-12710] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTCYCLOHYD-RXN HISTCYCLOHYD-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** acetyl-_c-acetyltransferase
+
** probable_phosphoribosyl-amp_cyclohydrolase
−
** 3-ketoacyl-_thiolase
+
** phosphoribosyl-amp_cyclohydrolase
−
** thiolase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
+
** [http://enzyme.expasy.org/EC/3.5.4.19 EC-3.5.4.19]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-13699]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CPD-13700]][c] '''+''' 1 [[ACETYL-COA]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[PHOSPHORIBOSYL-AMP]][c] '''=>''' 1 [[PHOSPHORIBOSYL-FORMIMINO-AICAR-P]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3,22-dioxochol-4-en-24-oyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 3-oxo-4-pregnene-20-carboxyl-CoA[c] '''+''' 1 acetyl-CoA[c]
+
** 1 H2O[c] '''+''' 1 1-(5-phospho-β-D-ribosyl)-AMP[c] '''=>''' 1 1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_15327]]
+
* Gene: [[Tiso_gene_5047]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_3855]]
+
* Gene: [[Tiso_gene_11297]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[orthology-athaliana]]
−
***EC-NUMBER
+
** Source: [[orthology-synechocystis]]
−
* [[Tiso_gene_3856]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-creinhardtii]]
−
***EC-NUMBER
+
−
* [[Tiso_gene_10116]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17451]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6948]], sitosterol degradation to androstenedione: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6948 PWY-6948]
+
* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
−
** '''2''' reactions found over '''18''' reactions in the full pathway
+
** '''10''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-6946]], cholesterol degradation to androstenedione II (cholesterol dehydrogenase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6946 PWY-6946]
+
−
** '''3''' reactions found over '''22''' reactions in the full pathway
+
−
* [[PWY-6945]], cholesterol degradation to androstenedione I (cholesterol oxidase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6945 PWY-6945]
+
−
** '''2''' reactions found over '''17''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20049 20049]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04037 R04037]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P44434 P44434]
 +
** [http://www.uniprot.org/uniprot/Q9JVH6 Q9JVH6]
 +
** [http://www.uniprot.org/uniprot/Q9X0C5 Q9X0C5]
 +
** [http://www.uniprot.org/uniprot/Q9PM71 Q9PM71]
 +
** [http://www.uniprot.org/uniprot/Q02130 Q02130]
 +
** [http://www.uniprot.org/uniprot/Q9RWD6 Q9RWD6]
 +
** [http://www.uniprot.org/uniprot/Q58825 Q58825]
 +
** [http://www.uniprot.org/uniprot/O28329 O28329]
 +
** [http://www.uniprot.org/uniprot/O34912 O34912]
 +
** [http://www.uniprot.org/uniprot/P0A5B3 P0A5B3]
 +
** [http://www.uniprot.org/uniprot/Q9HUB7 Q9HUB7]
 +
** [http://www.uniprot.org/uniprot/Q9KSW7 Q9KSW7]
 +
** [http://www.uniprot.org/uniprot/Q9K0H5 Q9K0H5]
 +
** [http://www.uniprot.org/uniprot/O67780 O67780]
 +
** [http://www.uniprot.org/uniprot/Q9PBD1 Q9PBD1]
 +
** [http://www.uniprot.org/uniprot/Q50837 Q50837]
 +
** [http://www.uniprot.org/uniprot/Q53158 Q53158]
 +
** [http://www.uniprot.org/uniprot/P45353 P45353]
 +
** [http://www.uniprot.org/uniprot/Q12670 Q12670]
 +
** [http://www.uniprot.org/uniprot/P00815 P00815]
 +
** [http://www.uniprot.org/uniprot/P07685 P07685]
 +
** [http://www.uniprot.org/uniprot/O59667 O59667]
 +
** [http://www.uniprot.org/uniprot/Q9X7C3 Q9X7C3]
 +
** [http://www.uniprot.org/uniprot/O82768 O82768]
 +
** [http://www.uniprot.org/uniprot/P10367 P10367]
 +
** [http://www.uniprot.org/uniprot/P06989 P06989]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=acetyl-_c-acetyltransferase}}
+
{{#set: common name=probable_phosphoribosyl-amp_cyclohydrolase}}
−
{{#set: common name=3-ketoacyl-_thiolase}}
+
{{#set: common name=phosphoribosyl-amp_cyclohydrolase}}
−
{{#set: common name=thiolase}}
+
{{#set: ec number=EC-3.5.4.19}}
−
{{#set: ec number=EC-2.3.1.16}}
+
{{#set: gene associated=Tiso_gene_5047|Tiso_gene_11297}}
−
{{#set: gene associated=Tiso_gene_15327|Tiso_gene_3855|Tiso_gene_3856|Tiso_gene_10116|Tiso_gene_17451}}
+
{{#set: in pathway=HISTSYN-PWY}}
−
{{#set: in pathway=PWY-6948|PWY-6946|PWY-6945}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:26, 21 March 2018

Reaction HISTCYCLOHYD-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • probable_phosphoribosyl-amp_cyclohydrolase
    • phosphoribosyl-amp_cyclohydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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