Difference between revisions of "RXN-7648"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17784 RXN-17784] == * direction: ** LEFT-TO-RIGHT * common name: ** Acyl-CoA dehydrogenase ** a...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7648 RXN-7648] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17784 RXN-17784] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7648 RXN-7648] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Acyl-CoA dehydrogenase
 
−
** acyl-_dehydrogenase
 
−
** acyl-CoA_dehydrogenase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
+
** [http://enzyme.expasy.org/EC/1.14.11.9 EC-1.14.11.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[CPD-18346]][c] '''+''' 1 [[ETF-Oxidized]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[CPD-19163]][c]
+
** 1 [[CPD-6991]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-6992]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 cis-vaccenoyl-CoA[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 (2E,11Z)-octadecenoyl-CoA[c]
+
** 1 (2S)-pinocembrin[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''=>''' 1 (+)-pinobanksin[c] '''+''' 1 CO2[c] '''+''' 1 succinate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_6475]]
+
* Gene: [[Tiso_gene_3330]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-athaliana]]
−
***AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_8271]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_8272]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_16631]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_5449]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_16113]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5059]], pinobanksin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5059 PWY-5059]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-athaliana]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R07993 R07993]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Acyl-CoA dehydrogenase}}
+
{{#set: ec number=EC-1.14.11.9}}
−
{{#set: common name=acyl-_dehydrogenase}}
+
{{#set: gene associated=Tiso_gene_3330}}
−
{{#set: common name=acyl-CoA_dehydrogenase}}
+
{{#set: in pathway=PWY-5059}}
−
{{#set: ec number=EC-1.3.8}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: gene associated=Tiso_gene_6475|Tiso_gene_8271|Tiso_gene_8272|Tiso_gene_16631|Tiso_gene_5449|Tiso_gene_16113}}
+
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:26, 21 March 2018

Reaction RXN-7648

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5059, pinobanksin biosynthesis: PWY-5059
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-7648&oldid=41586"