Difference between revisions of "RXN-6002"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETOOHBUTREDUCTOISOM-RXN ACETOOHBUTREDUCTOISOM-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6002 RXN-6002] == * direction: ** LEFT-TO-RIGHT * common name: ** aldehyde_dehydrogenase * ec n...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETOOHBUTREDUCTOISOM-RXN ACETOOHBUTREDUCTOISOM-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6002 RXN-6002] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 2,3-Dihydroxy-3-methylbutanoate:DP+ oxidoreductase (isomerizing), chloroplast
+
** aldehyde_dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.86 EC-1.1.1.86]
+
** [http://enzyme.expasy.org/EC/1.2.1.5 EC-1.2.1.5]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-ACETO-2-HYDROXY-BUTYRATE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[1-KETO-2-METHYLVALERATE]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[CPD-16618]][c] '''=>''' 1 [[NADH-P-OR-NOP]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[MAL]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (S)-2-aceto-2-hydroxybutanoate[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 (R)-2,3-dihydroxy-3-methylpentanoate[c]
+
** 1 H2O[c] '''+''' 1 NAD(P)+[c] '''+''' 1 L-malic semialdehyde[c] '''=>''' 1 NAD(P)H[c] '''+''' 2 H+[c] '''+''' 1 (S)-malate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10173]]
+
* Gene: [[Tiso_gene_7322]]
−
** EXPERIMENTAL_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
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*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
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** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5103]], L-isoleucine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103]
+
* [[PWY-3641]], L-carnitine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3641 PWY-3641]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
+
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[manual]]:
+
* Category: [[annotation]]
−
** [[primary_network]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[annotation]]:
+
*** Tool: [[pathwaytools]]
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13493 13493]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P06168 P06168]
 
−
** [http://www.uniprot.org/uniprot/P44822 P44822]
 
−
** [http://www.uniprot.org/uniprot/O25097 O25097]
 
−
** [http://www.uniprot.org/uniprot/Q02138 Q02138]
 
−
** [http://www.uniprot.org/uniprot/Q57179 Q57179]
 
−
** [http://www.uniprot.org/uniprot/Q9JTI3 Q9JTI3]
 
−
** [http://www.uniprot.org/uniprot/Q9PHN5 Q9PHN5]
 
−
** [http://www.uniprot.org/uniprot/P05793 P05793]
 
−
** [http://www.uniprot.org/uniprot/P38674 P38674]
 
−
** [http://www.uniprot.org/uniprot/Q59500 Q59500]
 
−
** [http://www.uniprot.org/uniprot/Q01292 Q01292]
 
−
** [http://www.uniprot.org/uniprot/Q05758 Q05758]
 
−
** [http://www.uniprot.org/uniprot/O82043 O82043]
 
−
** [http://www.uniprot.org/uniprot/P78827 P78827]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=2,3-Dihydroxy-3-methylbutanoate:DP+ oxidoreductase (isomerizing), chloroplast}}
+
{{#set: common name=aldehyde_dehydrogenase}}
−
{{#set: ec number=EC-1.1.1.86}}
+
{{#set: ec number=EC-1.2.1.5}}
−
{{#set: gene associated=Tiso_gene_10173}}
+
{{#set: gene associated=Tiso_gene_7322}}
−
{{#set: in pathway=PWY-5103|ILEUSYN-PWY}}
+
{{#set: in pathway=PWY-3641}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation}}
+

Latest revision as of 19:26, 21 March 2018

Reaction RXN-6002

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • aldehyde_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-3641, L-carnitine degradation III: PWY-3641
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-6002&oldid=41621"