Difference between revisions of "RXN-15509"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4891 TAX-48...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15509 RXN-15509] == * direction: ** REVERSIBLE * common name: ** phosphoglycerate_mutase ** ORF...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15509 RXN-15509] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4891 TAX-4891]
+
** REVERSIBLE
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
 
* common name:
 
* common name:
−
** 3-methylbutanol biosynthesis (engineered)
+
** phosphoglycerate_mutase
 +
** ORF
 +
** plastid_phosphoglycerate_mutase_protein
 +
** bisphosphoglycerate-dependent_phosphoglycerate_mutase
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''6''' reactions found over '''7''' reactions in the full pathway
+
* With identifiers:
−
* [[2-ISOPROPYLMALATESYN-RXN]]
+
** 1 [[23-DIPHOSPHOGLYCERATE]][c] '''+''' 1 [[Protein-Histidines]][c] '''<=>''' 1 [[CPD-16758]][c] '''+''' 1 [[Protein-pi-phospho-L-histidines]][c]
−
** 1 associated gene(s):
+
* With common name(s):
−
*** [[Tiso_gene_11453]]
+
** 1 2,3-diphospho-D-glycerate[c] '''+''' 1 a [protein]-L-histidine[c] '''<=>''' 1 2/3-phospho-D-glycerate[c] '''+''' 1 a [protein]-N&pi;-phospho-L-histidine[c]
−
** 7 reconstruction source(s) associated:
+
 
−
*** [[annotation-experimental_annotation]]
+
== Genes associated with this reaction  ==
−
*** [[orthology-esiliculosus]]
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[annotation-in-silico_annotation]]
+
* Gene: [[Tiso_gene_14530]]
−
*** [[orthology-athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[orthology-synechocystis]]
+
*** Assignment: EC-NUMBER
−
*** [[manual-primary_network]]
+
* Gene: [[Tiso_gene_2841]]
−
*** [[orthology-creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[3-ISOPROPYLMALDEHYDROG-RXN]]
+
*** Assignment: EC-NUMBER
−
** 1 associated gene(s):
+
* Gene: [[Tiso_gene_16271]]
−
*** [[Tiso_gene_2920]]
+
** Source: [[annotation-in-silico_annotation]]
−
** 4 reconstruction source(s) associated:
+
*** Assignment: EC-NUMBER
−
*** [[orthology-athaliana]]
+
* Gene: [[Tiso_gene_14664]]
−
*** [[annotation-experimental_annotation]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[orthology-synechocystis]]
+
*** Assignment: EC-NUMBER
−
*** [[orthology-esiliculosus]]
+
* Gene: [[Tiso_gene_2365]]
−
* [[3-ISOPROPYLMALISOM-RXN]]
+
** Source: [[annotation-in-silico_annotation]]
−
** 1 associated gene(s):
+
*** Assignment: EC-NUMBER
−
*** [[Tiso_gene_12778]]
+
* Gene: [[Tiso_gene_7201]]
−
** 4 reconstruction source(s) associated:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[annotation-experimental_annotation]]
+
*** Assignment: EC-NUMBER
−
*** [[orthology-athaliana]]
+
* Gene: [[Tiso_gene_9923]]
−
*** [[annotation-in-silico_annotation]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[orthology-esiliculosus]]
+
*** Assignment: EC-NUMBER
−
* [[RXN-7693]]
+
* Gene: [[Tiso_gene_9922]]
−
** 5 associated gene(s):
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[Tiso_gene_5424]]
+
*** Assignment: EC-NUMBER
−
*** [[Tiso_gene_5425]]
+
== Pathways  ==
−
*** [[Tiso_gene_6563]]
+
== Reconstruction information  ==
−
*** [[Tiso_gene_6562]]
+
* Category: [[annotation]]
−
*** [[Tiso_gene_7649]]
+
** Source: [[annotation-in-silico_annotation]]
−
** 1 reconstruction source(s) associated:
+
*** Tool: [[pathwaytools]]
−
*** [[annotation-in-silico_annotation]]
+
** Source: [[annotation-experimental_annotation]]
−
* [[RXN-7800]]
+
*** Tool: [[pathwaytools]]
−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
* [[RXN-8991]]
+
−
** 1 associated gene(s):
+
−
*** [[Tiso_gene_12778]]
+
−
** 4 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-athaliana]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
== Reaction(s) not found ==
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7692 RXN-7692]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-4891}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: taxonomic range=TAX-2}}
+
{{#set: common name=phosphoglycerate_mutase}}
−
{{#set: common name=3-methylbutanol biosynthesis (engineered)}}
+
{{#set: common name=ORF}}
−
{{#set: reaction found=6}}
+
{{#set: common name=plastid_phosphoglycerate_mutase_protein}}
−
{{#set: total reaction=7}}
+
{{#set: common name=bisphosphoglycerate-dependent_phosphoglycerate_mutase}}
−
{{#set: completion rate=86.0}}
+
{{#set: gene associated=Tiso_gene_14530|Tiso_gene_2841|Tiso_gene_16271|Tiso_gene_14664|Tiso_gene_2365|Tiso_gene_7201|Tiso_gene_9923|Tiso_gene_9922}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:27, 21 March 2018

Reaction RXN-15509

  • direction:
    • REVERSIBLE
  • common name:
    • phosphoglycerate_mutase
    • ORF
    • plastid_phosphoglycerate_mutase_protein
    • bisphosphoglycerate-dependent_phosphoglycerate_mutase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-15509&oldid=41659"