Difference between revisions of "RXN-18200"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3661-1 PWY-3661-1] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 T...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18200 RXN-18200] == * direction: ** REVERSIBLE * common name: ** 3-isopropylmalate dehydrogenas...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3661-1 PWY-3661-1] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18200 RXN-18200] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
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** REVERSIBLE
 
* common name:
 
* common name:
** glycine betaine degradation II (mammalian)
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** 3-isopropylmalate dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''3''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
* [[GLYOHMETRANS-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[CPDQT-40]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CPD-19487]][c]
** 4 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_16153]]
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** 1 NAD+[c] '''+''' 1 3-(7'-methylthio)heptylmalate[c] '''<=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 3-isopropyl-10-(methylthio)-2-oxodecanoate[c]
*** [[Tiso_gene_16154]]
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*** [[Tiso_gene_18652]]
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== Genes associated with this reaction  ==
*** [[Tiso_gene_7776]]
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Genes have been associated with this reaction based on different elements listed below.
** 4 reconstruction source(s) associated:
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* Gene: [[Tiso_gene_2920]]
*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-experimental_annotation]]
*** [[manual-primary_network]]
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*** Assignment: EC-NUMBER
*** [[annotation-experimental_annotation]]
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== Pathways  ==
*** [[orthology-esiliculosus]]
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* [[PWYQT-4450]], aliphatic glucosinolate biosynthesis, side chain elongation cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4450 PWYQT-4450]
* [[RXN66-576]]
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** '''10''' reactions found over '''30''' reactions in the full pathway
** 1 associated gene(s):
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== Reconstruction information  ==
*** [[Tiso_gene_2717]]
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* Category: [[annotation]]
** 1 reconstruction source(s) associated:
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** Source: [[annotation-experimental_annotation]]
*** [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
* [[RXN66-577]]
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** 1 associated gene(s):
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*** [[Tiso_gene_14788]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.5-RXN 2.1.1.5-RXN]
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== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-40674}}
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{{#set: direction=REVERSIBLE}}
{{#set: common name=glycine betaine degradation II (mammalian)}}
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{{#set: common name=3-isopropylmalate dehydrogenase}}
{{#set: reaction found=3}}
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{{#set: gene associated=Tiso_gene_2920}}
{{#set: total reaction=4}}
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{{#set: in pathway=PWYQT-4450}}
{{#set: completion rate=75.0}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:27, 21 March 2018

Reaction RXN-18200

  • direction:
    • REVERSIBLE
  • common name:
    • 3-isopropylmalate dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 3-(7'-methylthio)heptylmalate[c] <=> 1 H+[c] + 1 NADH[c] + 1 3-isopropyl-10-(methylthio)-2-oxodecanoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWYQT-4450, aliphatic glucosinolate biosynthesis, side chain elongation cycle: PWYQT-4450
    • 10 reactions found over 30 reactions in the full pathway

Reconstruction information

External links