Difference between revisions of "Tiso gene 7561"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10711 RXN-10711] == * direction: ** LEFT-TO-RIGHT * common name: ** sialate_o-acetylesterase-li...")
(Created page with "Category:Gene == Gene Tiso_gene_7561 == * right end position: ** 11030 * transcription direction: ** POSITIVE * left end position: ** 1767 * centisome position: ** 16.0170...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10711 RXN-10711] ==
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== Gene Tiso_gene_7561 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 11030
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* common name:
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* transcription direction:
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** sialate_o-acetylesterase-like_protein
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** POSITIVE
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** protein_chloroplastic
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* left end position:
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** alpha_beta_hydrolase_fold_protein
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** 1767
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** serine_esterase
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* centisome position:
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** ORF
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** 16.01704   
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** lysophospholipase
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** alpha_beta_hydrolase
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** para-nitrobenzyl_esterase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.4.11-RXN]]
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** 1 [[CPD-10546]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[METOH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[INDOLE_ACETATE_AUXIN]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 methyl (indol-3-yl)acetate[c] '''+''' 1 H2O[c] '''=>''' 1 methanol[c] '''+''' 1 H+[c] '''+''' 1 indole-3-acetate[c]
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* Reaction: [[RXN-13334]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-16261]]
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* [[Tiso_gene_4606]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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== Pathways associated ==
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* [[Tiso_gene_9429]]
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* [[PWY-6367]]
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** IN-SILICO_ANNOTATION
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* [[PWY-6351]]
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***EC-NUMBER
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* [[PWY-7039]]
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* [[Tiso_gene_19778]]
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* [[LIPASYN-PWY]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16518]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17029]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_1537]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_1538]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2556]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_11351]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_10066]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_1922]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4650]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12686]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY-6303]], methyl indole-3-acetate interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6303 PWY-6303]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=11030}}
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{{#set: common name=sialate_o-acetylesterase-like_protein}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=protein_chloroplastic}}
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{{#set: left end position=1767}}
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{{#set: common name=alpha_beta_hydrolase_fold_protein}}
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{{#set: centisome position=16.01704    }}
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{{#set: common name=serine_esterase}}
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{{#set: reaction associated=3.1.4.11-RXN|RXN-13334|RXN-16261}}
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{{#set: common name=ORF}}
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{{#set: pathway associated=PWY-6367|PWY-6351|PWY-7039|LIPASYN-PWY}}
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{{#set: common name=lysophospholipase}}
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{{#set: common name=alpha_beta_hydrolase}}
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{{#set: common name=para-nitrobenzyl_esterase}}
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{{#set: ec number=EC-3.1.1.1}}
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{{#set: gene associated=Tiso_gene_4606|Tiso_gene_9429|Tiso_gene_19778|Tiso_gene_16518|Tiso_gene_17029|Tiso_gene_1537|Tiso_gene_1538|Tiso_gene_2556|Tiso_gene_11351|Tiso_gene_10066|Tiso_gene_1922|Tiso_gene_4650|Tiso_gene_12686}}
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{{#set: in pathway=PWY-6303}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:28, 21 March 2018

Gene Tiso_gene_7561

  • right end position:
    • 11030
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1767
  • centisome position:
    • 16.01704
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7561&oldid=41803"