Difference between revisions of "PWY-6679"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10711 RXN-10711] == * direction: ** LEFT-TO-RIGHT * common name: ** sialate_o-acetylesterase-li...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6679 PWY-6679] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2062 TAX-20...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10711 RXN-10711] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6679 PWY-6679] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2062 TAX-2062]
 
* common name:
 
* common name:
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** sialate_o-acetylesterase-like_protein
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** jadomycin biosynthesis
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** protein_chloroplastic
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** alpha_beta_hydrolase_fold_protein
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** serine_esterase
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** ORF
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** lysophospholipase
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** alpha_beta_hydrolase
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** para-nitrobenzyl_esterase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''9''' reactions in the full pathway
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** 1 [[CPD-10546]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INDOLE_ACETATE_AUXIN]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[METOH]][c]
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* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
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* With common name(s):
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** 4 associated gene(s):
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** 1 methyl (indol-3-yl)acetate[c] '''+''' 1 H2O[c] '''=>''' 1 indole-3-acetate[c] '''+''' 1 H+[c] '''+''' 1 methanol[c]
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*** [[Tiso_gene_2812]]
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*** [[Tiso_gene_3800]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_5029]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_7965]]
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* [[Tiso_gene_4650]]
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** 5 reconstruction source(s) associated:
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** IN-SILICO_ANNOTATION
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*** [[annotation-experimental_annotation]]
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***EC-NUMBER
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*** [[orthology-athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_17029]]
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*** [[manual-primary_network]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-esiliculosus]]
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***EC-NUMBER
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== Reaction(s) not found ==
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* [[Tiso_gene_10066]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11975 RXN-11975]
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11977 RXN-11977]
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11981 RXN-11981]
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* [[Tiso_gene_2556]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11982 RXN-11982]
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11983 RXN-11983]
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11984 RXN-11984]
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* [[Tiso_gene_4606]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11985 RXN-11985]
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11995 RXN-11995]
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***EC-NUMBER
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* [[Tiso_gene_19778]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_11351]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_9429]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_1922]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_12686]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_1538]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_16518]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_1537]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-6303]], methyl indole-3-acetate interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6303 PWY-6303]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2062}}
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{{#set: common name=sialate_o-acetylesterase-like_protein}}
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{{#set: common name=jadomycin biosynthesis}}
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{{#set: common name=protein_chloroplastic}}
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{{#set: reaction found=1}}
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{{#set: common name=alpha_beta_hydrolase_fold_protein}}
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{{#set: total reaction=9}}
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{{#set: common name=serine_esterase}}
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{{#set: completion rate=11.0}}
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{{#set: common name=ORF}}
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{{#set: common name=lysophospholipase}}
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{{#set: common name=alpha_beta_hydrolase}}
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{{#set: common name=para-nitrobenzyl_esterase}}
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{{#set: ec number=EC-3.1.1.1}}
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{{#set: gene associated=Tiso_gene_4650|Tiso_gene_17029|Tiso_gene_10066|Tiso_gene_2556|Tiso_gene_4606|Tiso_gene_19778|Tiso_gene_11351|Tiso_gene_9429|Tiso_gene_1922|Tiso_gene_12686|Tiso_gene_1538|Tiso_gene_16518|Tiso_gene_1537}}
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{{#set: in pathway=PWY-6303}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:28, 21 March 2018

Pathway PWY-6679

  • taxonomic range:
  • common name:
    • jadomycin biosynthesis
  • Synonym(s):

Reaction(s) found

1 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6679&oldid=41821"