Difference between revisions of "Tiso gene 17085"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16659 RXN-16659] == * direction: ** LEFT-TO-RIGHT * common name: ** peptidoglycan transpeptidas...")
(Created page with "Category:Gene == Gene Tiso_gene_17085 == * right end position: ** 1655 * transcription direction: ** POSITIVE * left end position: ** 1 * centisome position: ** 2.54582500...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16659 RXN-16659] ==
+
== Gene Tiso_gene_17085 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 1655
−
* common name:
+
* transcription direction:
−
** peptidoglycan transpeptidase (Gram-negative bacteria)
+
** POSITIVE
−
** beta-lactamase
+
* left end position:
−
* ec number:
+
** 1
−
** [http://enzyme.expasy.org/EC/3.4.16.4 EC-3.4.16.4]
+
* centisome position:
 +
** 2.54582500e-2
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[TUBULIN-N-ACETYLTRANSFERASE-RXN]]
−
** 1 [[CPD-17927]][c] '''+''' 1 [[CPD-17931]][c] '''=>''' 1 [[CPD-17932]][c] '''+''' 1 [[D-ALANINE]][c]
+
−
* With common name(s):
+
−
** 1 a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine) pentapeptide[c] '''+''' 1 a peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine) tetrapeptide[c] '''=>''' 1 a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)[c] '''+''' 1 D-alanine[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_18870]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY0-1586]], peptidoglycan maturation (meso-diaminopimelate containing): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1586 PWY0-1586]
+
−
** '''2''' reactions found over '''12''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
== Pathways associated ==
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=1655}}
−
{{#set: common name=peptidoglycan transpeptidase (Gram-negative bacteria)}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=beta-lactamase}}
+
{{#set: left end position=1}}
−
{{#set: ec number=EC-3.4.16.4}}
+
{{#set: centisome position=2.54582500e-2}}
−
{{#set: gene associated=Tiso_gene_18870}}
+
{{#set: reaction associated=TUBULIN-N-ACETYLTRANSFERASE-RXN}}
−
{{#set: in pathway=PWY0-1586}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:28, 21 March 2018

Gene Tiso_gene_17085

  • right end position:
    • 1655
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1
  • centisome position:
    • 2.54582500e-2
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17085&oldid=41828"